Microbacterium paludicola: BO218_05780
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Entry
BO218_05780 CDS
T04601
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mpal
Microbacterium paludicola
Pathway
mpal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BO218_05780
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mpal01007
]
BO218_05780
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpal03016
]
BO218_05780
Enzymes [BR:
mpal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BO218_05780
Amino acid related enzymes [BR:
mpal01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BO218_05780
Transfer RNA biogenesis [BR:
mpal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BO218_05780
Prokaryotic type
BO218_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
APF33762
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All DBs
Position
complement(1199008..1201527)
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AA seq
839 aa
AA seq
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MRVPLSWLREYVDVPADAAPEDILAALVSVGFEEEDVHGFDLTGPIVVGRVVSFEPEPQS
NGKTIRWCQVDVGEANGGIRGIVCGASNFSEGDKVVVTLPGAVLPGPFPIAARKTYGHVS
DGMIASAKELGLGDEHSGILRLTELGLASDEDAPVGADAIALLGLDDAAIDVNVTPDRGY
ALSVRGIAREYSHATGAAFRDPGLREFDELEHPATGFDVAVDDRAPIRGRVGATEFAVRV
VSGVDPSRPTPPWMVARLTLAGIRSLGILIDITNYVMVELGNPIHGYDLDKLSGGITVRR
ATPGEKLTTLDGKERTLDGEDLLITDESGPIGLAGVMGGGTTEMTDATRNVLIEAAIFDT
VTIARTARRHKLPSEASRRFERGVDPLLPFVAARRVADLMVELAGGTLEPVGGALFSEVF
LEAIDLPRGFVAGLIGIDYTDDEVVAALETIGAEVSGTAAGWEVIPPSWRPDLTDKWTLA
EEVARIHGLDRVPSVLPTAPSGRGLTDAQKGRRRVSNALAAAGFVETPSFPFTTRDSNDL
HGSASGEELPSVKIANPLDGQAPYLRRSLVPGLLQVAHRNVSRGLTDLALFEVGAVFLPE
PGTQYGTATVPPLAVRPDDATLAELHASIPPQPRHVAVLVAGNASPKKPGQAAVTADLSD
VFAAVAAIGSAAGVDIEISQTRRAALHPGRAAALTVGGVEVGYAGELHPEVSAAADLSGR
VLVAEVDLDAVLASAGERVVVASLSGYPAATQDVSLVVPDSVTAGALASALSEGAGSLLE
SLRLVDDYRGSGVPEGSKSLTFALRFRADDRTLTAAEASEAKLAGVAVAAERFGAVIRD
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttccgctctcgtggttgcgtgagtacgtcgatgtgccggcggatgccgcgccc
gaggacatcctcgcggcactcgtgtcggtcggcttcgaagaggaggacgtccacgggttc
gacctcaccggtccgatcgtcgtcggccgcgtggtctcgttcgagcccgagccgcagtcc
aacggcaagacgatccgctggtgccaggtcgacgtgggggaggccaacggcggcatccgc
ggcatcgtctgcggcgcctcgaacttctccgagggcgacaaggtcgtcgtcacccttccc
ggcgccgtgctgcccggcccgttcccgatcgcagcccgcaagacgtacggccacgtctcg
gacggcatgatcgcctcggcgaaggagctgggcctcggcgacgagcactccggcatcctg
cgcctgaccgagctcggtctcgccagtgacgaggatgcgccggtcggtgccgacgcgatc
gcgctgctcggcctcgacgacgctgccatcgacgtcaacgtcacccccgaccgcggctac
gcgctgtcggtgcgcggcatcgcccgcgagtactcgcacgcgaccggtgcggcattccgc
gaccccggcctgcgcgagttcgacgagctcgagcaccccgcgacgggcttcgacgtcgcg
gtcgacgaccgggcgccgatccgtggccgcgtcggtgcgaccgagttcgcggtgcgcgtc
gtctcgggcgtcgacccgtcacggccgacgccgccgtggatggtcgcgcgtctcacgctc
gccggcatccgctcgctcggcatcctcatcgacatcaccaactacgtcatggtggagctc
ggcaacccgatccacggctacgacctcgacaagctcagcggcggcatcacggtgcggcgc
gcgacgccgggggagaagctcacgacgctcgacggcaaggaacgcacgctcgacggcgaa
gaccttctcatcaccgacgagtcgggccccatcggcctcgccggcgtcatgggcggcggc
acgaccgagatgacggatgcgacgcgcaacgtgctgatcgaggccgcgatcttcgacacc
gtcacgatcgcccgcaccgctcgtcgtcacaagctgccgagcgaggcctcgcggcgcttc
gagcgcggtgtcgacccgctgctgcccttcgtggccgcccgccgcgtcgccgacctcatg
gtcgagctcgccggcggcacgctcgagccggtcggcggcgccctgttcagcgaggtgttc
ctcgaggcgatcgacctgccgcgcggcttcgtcgcaggcctcatcggcatcgactacacc
gacgacgaggtcgtcgcagccctcgagacgatcggcgcagaggtgtcgggcacggctgcc
ggttgggaggtcattccgccgtcgtggcgtcccgacctcaccgacaaatggacgctggcc
gaagaggtcgcgcgcatccacgggctcgaccgcgttccttcggtcctcccaacggcaccg
tccggtcgcggactgacggatgcccagaagggccgtcgtcgcgtgtcgaacgcactggcg
gccgcgggcttcgtcgagaccccgtcgttcccgttcacgacgcgcgacagcaacgacctg
cacggctccgcctcgggcgaggaactgccctcggtcaagatcgccaacccgctcgacggg
caggccccctacctgcgccgctcgctcgtgccgggcctgctgcaggtcgcccaccgcaac
gtctcacgtggcctgacggatctcgccctcttcgaggtcggcgcggtcttcctccccgag
cccggcacgcagtacggcaccgcgacggttccgccgctcgctgtgcgtcccgacgacgcc
acactcgcggagctccacgcgtcgatcccgccgcagccgcgtcacgtcgcggtgctcgtc
gccggcaatgcgtcgccgaagaagccgggccaggccgccgtcacggccgatctcagcgac
gtgttcgccgccgtcgcagcgatcggctcggccgccggcgtcgacatcgagatctcgcag
acccggcgcgccgcgctgcatccgggtcgcgccgccgcgctcaccgtcggcggtgtcgag
gtcggttacgccggggagctgcatcccgaggtctcggccgcggccgacctgtcgggccgg
gtcctcgtcgccgaggtcgacctcgacgcggttctggcgagcgcgggagagcgggtcgtc
gtcgcgtcgctgtcgggctaccccgcggccacgcaggacgtctcgctcgtcgtccccgac
tcagtgacagcgggtgctcttgcctcggcgctgtcggagggagccggctcgcttctcgaa
tcgctccgactcgtcgacgactaccgcggctcgggcgttcccgaaggctcgaagagtctg
accttcgcgctgcgcttccgcgccgatgaccgtaccctgaccgcggccgaggcgagcgag
gccaagctcgcgggcgtcgccgtcgcggccgagcgcttcggcgccgtcatccgcgactga
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