Microbacterium paludicola: BO218_06015
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Entry
BO218_06015 CDS
T04601
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mpal
Microbacterium paludicola
Pathway
mpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BO218_06015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpal03019
]
BO218_06015
03016 Transfer RNA biogenesis [BR:
mpal03016
]
BO218_06015
Enzymes [BR:
mpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BO218_06015
Messenger RNA biogenesis [BR:
mpal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BO218_06015
Transfer RNA biogenesis [BR:
mpal03016
]
Prokaryotic type
tRNA degradation factors
BO218_06015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_KhpA-B
KH_NusA_1st
KH_PNO1_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
APF33804
UniProt:
A0ABU1HVY1
LinkDB
All DBs
Position
complement(1244049..1246328)
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AA seq
759 aa
AA seq
DB search
MEGPEITAAEAVLDNGRFGTRTVRFETGRLAQQAQGAVAAYLDEETMLLSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVITVLSIAPGEYYDALAINAASASTQISGLPFSGPIAGVRLALVPGHGEHEDQWVVFPN
QKVVEEAVFDLTVAGRVLPDGEVAIMMVEAEATEGSWNLIKGGAVKPSEEVVAQGLEAAK
PFIKQLVEAQASMAASASREPGVYPVFPPYAPEVYDFVAERAYGELTSVYQIADKQERQN
ADDAIKERVKGEVAAAVEAEQLPASALAEFSAAYKSVTKKIVRGRILSEGVRIDGRGLAD
IRPLDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPTTSKRYLHHYNFP
PYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSV
CASTLSLLNAGVPLRAPVAGIAMGLVSDQVDGETRYAALTDILGAEDALGDMDFKVAGTS
EFVTAIQLDTKLDGIPSSVLSAALTQAKEARLTILGVLNAAIDSPDEMAPTAPRVISVQI
PVDKIGELIGPKGKTINSIQDETGADISIEEDGTVYIGATDGPSAEAARARVNAIANPTN
PEVGEQFLGTVVKIATFGAFISLLPGKDGLLHVSEVRKLAGGKRVENVEDVLGVGQKILV
RITKIDDRGKLSLEPVLEETADQDGSAAASEGPEAPAEG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtccagaaatcaccgcagccgaagccgtcctcgataacggccgcttcggcacc
cgcaccgtccggttcgagaccggacgcctggcacagcaggcgcagggcgccgttgccgcc
tacctcgacgaggagacgatgctcctctcggccaccagcgccggcaagcacccgcgcgaa
ggcttcgacttcttcccgctcaccgtcgacgtcgaagagcgttcgtacgccgccggcaag
atccccggctcgttcttccgtcgcgagggacgcccctcgaccgaggcgatcctcgtctgc
cgtctgatcgaccgtccgctgcgcccgtcgttcgtcgacggcctgcgcaacgaggtccag
atcgtcatcacggtcctctcgatcgcgcccggcgagtactacgacgcgctcgcgatcaac
gcggcgtccgcttcgacgcagatctcggggctgccgttctcgggcccgatcgccggtgtc
cgcctggcactcgttcccggtcacggcgagcacgaggaccagtgggtcgtcttcccgaac
cagaaggtcgtcgaagaggccgtgttcgacctcaccgtcgccggccgggtcctccccgac
ggcgaagtggccatcatgatggtcgaggccgaggcgaccgagggcagctggaacctcatc
aagggcggcgccgtcaagccgagcgaagaggtcgtcgcacagggcctcgaggccgcgaag
cccttcatcaagcagctcgtcgaggcgcaggcttcgatggcggcctccgcgtcgcgtgag
ccgggtgtctaccccgtcttcccgccgtacgcccccgaggtctacgacttcgtcgccgag
cgtgcctacggcgagctgacgagcgtctaccagatcgccgacaagcaggagcgccagaac
gccgacgacgccatcaaggagcgcgtcaagggcgaggtcgccgctgccgtcgaggccgag
cagctcccggcatccgcgctcgcggagttctccgctgcgtacaagtcggtcaccaagaag
atcgtccgcggccgcatcctcagcgagggcgtccgcatcgacggtcgcggcctggccgac
atccgtccgctcgacgccgaggtgcaggtcatcccgcgcgtccacggctcggcgatcttc
cagcgcggcgagacccagatcctgggtgtcaccacgctgaacatgctgaagatggagcag
cagatcgactcgctgtcgcccacgacgagcaagcgctacctgcaccactacaacttcccg
ccctactcgaccggtgagaccggacgcgtcggcagcccgaagcgtcgcgagatcgggcac
ggcttcctcgccgagcgcgccctcgtgccggtgctgcccagccgcgaggagttcccgtac
gcgatccgtcaggtctccgaggccctcgggtcgaacggctcgacctcgatgggctcggtg
tgcgcctcgaccctgtcgctgctgaacgccggtgtgcccctgcgcgccccggtcgcgggc
atcgcgatgggtctcgtctccgaccaggtcgacggtgagacccgctacgcggcgctgacc
gacatcctgggcgccgaggacgcgctcggcgacatggacttcaaggtcgccggcacgagc
gagttcgtcacggccatccagctcgacacgaagctcgacggcatcccgtcgtcggtgctc
tcggcagcgctgacccaggccaaggaggctcgtctgacgatcctcggtgtcctcaacgcc
gcgatcgacagccccgacgagatggcgcccaccgctccgcgcgtcatcagcgtccagatc
ccggtcgacaagatcggcgagctgatcggccccaagggcaagacgatcaactcgatccag
gacgagaccggcgccgacatctcgatcgaggaggacggcaccgtctacatcggcgccacc
gacggcccctcggccgaggccgcccgtgcccgcgtgaacgcgatcgccaaccccaccaac
ccggaggtcggcgagcagttcctcggaaccgtcgtgaagatcgcgacgttcggcgcgttc
atctcgctcctgcccggcaaggacggactgctgcacgtcagcgaggtccgcaagctcgcc
ggcggcaagcgcgtggagaacgtcgaggatgtcctcggtgtcggccagaagatcctcgtt
cgcatcacgaagatcgacgaccgcggcaagctctccctcgagcccgttctcgaagagacc
gctgaccaggacggctcggccgcagcgagcgagggcccggaggctcccgccgaaggctga
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integrated database retrieval system
