Microbacterium paludicola: BO218_07880
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Entry
BO218_07880 CDS
T04601
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mpal
Microbacterium paludicola
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpal03400
]
BO218_07880
Enzymes [BR:
mpal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BO218_07880
DNA repair and recombination proteins [BR:
mpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BO218_07880
Prokaryotic type
BO218_07880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APF34111
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All DBs
Position
1638257..1639621
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AA seq
454 aa
AA seq
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MSSPSIVWFRDDLRLADHPALRAAIDRGEPVVGLYVLDEESEGIRPLGGAARWWLHHSLA
SLADDLRARGSHLVLRRGDAASVVRSLVDDIGAGAVFWNRRYGGPERAIDTALKDGLRSD
GVEVESFAANVLFEPWTVKTGSGTPFSVFTPFWNAARNLPAPREPLPRPREIPGLRSAPA
GDDLDDWELLPTRPDWAGGLRERWQPGEAAARARLREFLDHDLGSYDAARDEPSAGATSL
LSPRLRWGELSPHTVWHAGVETGGGTGAHATSASRFLSELGWREFAWHTLYHFPDLATKN
WRKGFDAFPWPALDPAHLTAWEKGETGVPMVDAGMRELWHTGYMHNRVRMVTASFLTKNL
LIDWRLGEQWFWDTLVDADGASNAFNWQWVAGSGADASPYFRIFNPERQAEKFDPKGLYI
GQWAPDSAGREPIVDLAATRKAALQAYEAVKRAR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgccttcgatcgtctggttccgcgacgacctgcgcctggccgaccaccccgcg
ctccgcgctgcgatcgaccgcggcgagcccgtcgtcgggctgtacgtgctcgacgaggag
tccgagggcatccgaccgctcggcggcgcagcacggtggtggctgcaccactcgctcgca
tcgctcgccgatgatctgcgcgctcgcgggtcgcatctcgtgctgcgccgcggggacgcg
gcatccgtcgtccggtcgctcgtcgacgacatcggagcaggtgcggtcttctggaaccgc
cgctacggcggacccgagcgcgcgatcgacaccgcgctgaaggacggcctccgctcggac
ggcgtcgaggtcgagtcgttcgccgccaacgtgctgttcgagccctggacggtcaagacc
ggcagcggcaccccgttctcggtcttcaccccgttctggaacgcggcacgcaacctgccc
gccccgcgcgagccgctcccccggccccgcgagatccccggcctgcggtcggcacccgcg
ggcgacgacctcgacgattgggagctgctgcccacccggcccgactgggcgggcggtctg
cgcgagcgctggcagcccggcgaggccgcggcgcgcgcacgcctccgtgagttcctcgac
cacgatctcggctcatacgacgccgcccgcgacgagccgagcgcgggcgcgacctcgctg
ctctcgccgcgcctgcgctggggcgagctgagcccgcacacggtctggcacgccggggtg
gagaccgggggcgggacaggcgcccatgcgacctccgcctcgcgtttcctctccgagctc
ggctggcgcgagttcgcctggcacacgctgtaccacttccccgacctggcgacgaagaac
tggcggaagggcttcgacgccttcccctggccggccctcgacccggcgcacctgacggcg
tgggagaagggcgagaccggcgtgccgatggtggatgccgggatgcgcgagctctggcac
accggctacatgcacaaccgggtgcggatggtcacggcatccttcctcacgaagaacctg
ctcatcgactggcgactcggcgagcagtggttctgggacaccctcgtcgacgccgacggc
gccagcaacgccttcaactggcagtgggtcgcggggtcaggggccgacgcgtcgccctat
ttccgcatcttcaaccccgaacggcaggccgagaagttcgacccgaaagggctgtacatc
gggcaatgggcgcccgacagcgcaggccgcgagccgatcgtcgacctcgccgcgacccgc
aaggcggcgctgcaggcgtacgaggcggtgaagcgggcgcggtga
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