Microbacterium paludicola: BO218_09915
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Entry
BO218_09915 CDS
T04601
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpal
Microbacterium paludicola
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpal03032
]
BO218_09915
03400 DNA repair and recombination proteins [BR:
mpal03400
]
BO218_09915
Enzymes [BR:
mpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BO218_09915
DNA replication proteins [BR:
mpal03032
]
Prokaryotic type
DNA Topoisomerases
BO218_09915
DNA repair and recombination proteins [BR:
mpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BO218_09915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Med14
Motif
Other DBs
NCBI-ProteinID:
APF34465
LinkDB
All DBs
Position
complement(2099014..2099976)
Genome browser
AA seq
320 aa
AA seq
DB search
MARLVRVRPDVDAGIRRIRSGKGFRYTDADGGVVGRRDLARIRTIVIPPAWQDVWICADP
QGHIQVVGTDDAGRRQYIYHPDWTRSRDKGKYARALQLAESLPRARSRATASLRRADLDR
ERVLAAAFRLLDRSALRIGSQRYLLQHGSRGLTTLRRRDASVADAVVSLAFSGKSGQRQA
LEIPDPDLATAIMLLIEGRPSSPLLAWQRQRRRVPLTPNDVNAYVRALTGGPFTAKDFRT
LRGTVVAADALARIGIAETARAVHQAEVEAVRAAATALGNTPAVARSSYIDPRVFERYRS
GMLLDTTVSPESAIRSLVLG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgactcgtccgggtccgacccgatgtggatgccggcatccggcgcatccgctcg
ggcaagggcttccggtacacggacgccgacggcggcgtggtcgggcggcgcgatctcgcc
cgcatccgcacgatcgtcatcccgccggcgtggcaggacgtctggatctgcgcggatccc
caggggcacatccaggtcgtcggaaccgacgatgcgggccgccgacagtacatctaccat
cccgactggacgcgcagccgcgacaagggcaagtacgcgagggcgctgcagctcgccgag
tccctgccgcgcgcccggtcccgggcgaccgcgtcgttgcgtcgcgccgacctcgaccgc
gaacgcgtcctcgcggcggcattccggctgctcgaccgctcggcgctgcgcatcgggtcg
cagcgctacctgctgcagcacggcagccgggggctgacgacgctccggcgccgcgacgcc
tcggtggccgacgccgtcgtgagcctggccttctcgggcaagagcgggcagcggcaggcg
ctcgagatccccgaccccgatctcgcgacggcgatcatgctgctcatcgaggggcggccc
tcgtcgccgttgctcgcgtggcagcggcagcgccggcgggtgccgctcaccccgaacgac
gtcaacgcgtacgtccgcgcgctgaccggcggcccgttcaccgcgaaggacttccgcacg
ctccgaggcaccgtcgtcgcggcggatgccctcgcccgcatcggcatcgccgagaccgcc
cgggccgtgcatcaggccgaggtcgaagcggtgcgcgccgcggcgacggcgctgggcaac
accccggcggtcgcgcgcagctcgtacatcgatccgcgcgtgttcgagcgttatcgctcg
gggatgctgctcgacacgaccgtctcgcccgagtccgccatccgttccctcgtcctcggt
tga
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integrated database retrieval system
