Microbacterium paludicola: BO218_12190
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Entry
BO218_12190 CDS
T04601
Name
(GenBank) helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
mpal
Microbacterium paludicola
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpal03032
]
BO218_12190
03029 Mitochondrial biogenesis [BR:
mpal03029
]
BO218_12190
Enzymes [BR:
mpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BO218_12190
DNA replication proteins [BR:
mpal03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BO218_12190
Mitochondrial biogenesis [BR:
mpal03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BO218_12190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Herpes_Helicase
AAA_22
AAA_16
AAA_24
Viral_helicase1
Pif1_2B_dom
AAA_5
UvrD_C_2
ATPase_2
DEAD
NACHT
NTPase_1
AAA_7
PhoH
AAA_29
nSTAND3
AAA_14
AAA_18
SLFN-g3_helicase
T2SSE
RuvB_N
ABC_tran
FtsK_SpoIIIE
RsgA_GTPase
NB-ARC
cobW
RNA_helicase
SH3_13
Motif
Other DBs
NCBI-ProteinID:
APF34850
LinkDB
All DBs
Position
2580310..2581689
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AA seq
459 aa
AA seq
DB search
MTLPPLSAEQEALFRRIETTRDHVFVTGRAGTGKSTLLQHLAWNTDKQIAICAPTGVAAL
NVEGQTIHSLFRLPIGLVADSELEQSEPTRRILNAIDTLVIDEISMVNADVMDAIDRSLR
QARRRRSEAFGGVQIVMFGDPYQLSPVPPRGDELKYIRDHYRSFWFFDAQVWAGPKADAG
AIRSDGLLDLGRVGAPLHIAELGEIHRQADAGFKEMLNAVRYGVVTADIAAALNAAGART
PPPPTGDEPPVITLATRNDAVNRINQRHLDALTGPVQTAKADVSGDFGRGETSYPADPEL
QLKVGAQVMFLRNDVAGYAGDGPRWVNGSIGTVTRIAGSSVRVELDGEEHDVEPAVWERF
RYAYDPGSRKLTREIVAEFTQFPLRLAWAVTIHKSQGKTYDRAIVDLGSGAFAPGQTYVA
LSRLTSLDGLYLSRPLRPSDILVDHDVRRFMAAVRAAGM
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaccttgccgcctctctccgctgagcaggaggcactgttccgccggatcgagacgacc
cgcgaccacgtcttcgtcaccgggcgagccggtaccggcaagtcgacactgctgcagcac
ctcgcgtggaacaccgacaagcagatcgcgatctgcgctccgacgggcgtcgctgcgctc
aacgtcgaggggcagacgatccactccctcttccggctgccgatcggactcgtcgccgac
agcgaactcgagcagtccgagccgacgcgccgcatcctcaacgcgatcgacacgctcgtc
atcgacgagatctcgatggtcaacgccgatgtgatggatgcgatcgaccggtcgttgcga
caagcgcgtcgtcggcgctccgaggcgttcggcggcgtgcagatcgtcatgttcggcgac
ccgtatcagctctcgccggtgccgccgcgcggcgacgagctgaagtacatccgcgatcac
tatcgctcgttctggttcttcgacgcgcaggtgtgggcgggcccgaaggcggatgccggc
gcgatccgctcggacggactgctcgatctcggccgggtcggcgctccgctgcacatcgcg
gagctcggcgagatccatcgtcaggcggacgcggggttcaaggagatgctcaacgccgtc
cggtacggcgtcgtcacggccgacatcgccgccgctctcaacgcggcgggcgcccgcaca
ccgccgcctcccaccggtgacgagccgcccgtcatcacgctcgcgacccgcaacgatgcc
gtcaaccgcatcaaccagcggcatctcgacgccctcacgggcccggtgcagacggcgaag
gccgatgtcagcggcgacttcgggcggggggagacgtcgtacccggccgaccccgagctg
cagctgaaggtcggcgcgcaggtgatgttcctccgcaacgacgtcgcgggctatgccggt
gacggcccgcgctgggtcaacggctccatcggaaccgtcacccgcatcgcggggtcatcg
gtccgcgtggagctcgacggcgaggagcacgacgtcgagcctgccgtctgggagcggttc
cgttacgcgtacgacccgggctcgcgcaagctgacccgcgagatcgtcgcggagttcacg
cagttcccgctccgactggcctgggcggtgacgatccacaagtcgcagggcaagacctac
gaccgtgcgatcgtcgacctcgggtcgggcgccttcgcgccggggcagacctacgtcgcg
ctctcgcgactgacctcgctcgacgggctctacctgtcgcgaccgctccggcccagcgac
atcctggtcgaccacgacgtgcggcgcttcatggccgccgtccgcgccgccggcatgtga
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