Microbacterium paludicola: BO218_13235
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Entry
BO218_13235 CDS
T04601
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mpal
Microbacterium paludicola
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpal03016
]
BO218_13235
Enzymes [BR:
mpal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BO218_13235
Transfer RNA biogenesis [BR:
mpal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BO218_13235
Prokaryotic type
BO218_13235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
APF35040
UniProt:
A0ABU1I0S6
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All DBs
Position
2781981..2782814
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AA seq
277 aa
AA seq
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MRLRLDIAYDGSGFSGWARQPGLRTVQGSIEAAVSRVLGGDAQLVVAGRTDAGVHASGQV
AHLDLSDAQEARLRRGRDPEPAALAARLNGVLGRYADVHVRATSVAPEGFDARFSAVWRR
YAYRVADRTTGYDPLERFRTTFVPVALDGAAMDAAARSLTGLHDFAAYCKPRPEATTIRT
LLEFDWRRDESGVLVANVKADAFCHSMVRALVGACVAVGEGRLDVEDVAVLRDAHRRTSA
FAVLAARGLTLTEVGYPADDLLAARAEQTRARRATDT
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgagactggacatcgcctacgacggatcggggttctcgggctgggcccgccag
ccgggcctgcggacagttcaggggtcgatcgaggcggccgtcagccgcgttctcggcggc
gacgcgcagctcgtcgtcgcgggccgtaccgatgccggcgtgcacgcctcgggtcaggtc
gcgcacctcgacctgagcgacgcgcaggaggcgcggctgcgacgtggccgcgaccccgag
ccggccgccctcgccgcgcgcttgaacggtgtgctgggccgttacgccgacgtccacgtg
cgggcgacatccgttgctccggaggggttcgacgcccggttctccgcggtctggcgacgc
tacgcgtaccgtgtcgccgaccgtacgacgggctacgacccgctcgagcgcttccgcacg
accttcgttccggtggccctcgacggcgcggcgatggatgccgccgcacgcagcctgacc
ggcctccacgatttcgccgcgtactgcaagccgcggcccgaggcgacgacgatccggacg
ctgctcgagttcgactggcggcgcgacgagagcggtgtgctcgtcgccaacgtcaaggcc
gacgcgttctgccacagcatggtgcgggccctcgtcggcgcgtgcgtcgcggtgggcgag
gggcggctcgacgtcgaggacgtcgcggtcctccgcgatgcgcaccgacggacgagcgcc
ttcgcggtgctggcggcgcgcgggctcacgctcacggaggtcggataccccgccgacgat
ctgctcgccgcacgcgcggagcagacccgcgcccgccgcgcaacggacacctga
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