Microbacterium paludicola: BO218_14300
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Entry
BO218_14300 CDS
T04601
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpal
Microbacterium paludicola
Pathway
mpal03420
Nucleotide excision repair
mpal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BO218_14300
03430 Mismatch repair
BO218_14300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpal03400
]
BO218_14300
Enzymes [BR:
mpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BO218_14300
DNA repair and recombination proteins [BR:
mpal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BO218_14300
MMR (mismatch excision repair)
Other MMR factors
BO218_14300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_11
EcoR124_C
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APF35228
LinkDB
All DBs
Position
3020393..3022861
Genome browser
AA seq
822 aa
AA seq
DB search
MPEPIKPVIVGSAASARPGASSGERPDADLLEGLNPPQREAVTYRGPALLIVAGAGSGKT
RVLTHRIASLLRGREAWPSQILAITFTNKAAGEMRERVQQLIGDSAQGMWISTFHSACVR
ILRREAQQFGFTKNFTIYDSGDSRALIKRLVKEHEADAFGLTPAGVQSRISKLKNELADA
DSYARQANMSDPAERVFVELFGAYQSALQRANAFDFDDLIAQTVYLFRAFPHVADVYRKR
FRHILVDEYQDTNHAQYALIHELTRPVQGQGGDAFSSGGMMIFEPESAPEVEAASLTVVG
DSDQSIYAFRGADIRNITEFERDYPGAKVVLLEQNYRSTQNILSAANAVISNNFDRKDKK
LWTDVGAGDAIVGFTGYSQHDEAQFVADEIEALHRSSVPYSQMAVFYRTNSQSRALEEIF
IRAAIPYKIMGGTKFYDRAEIKDALAYVVAVANPADELAVRRILNRPRRGIGDVTETSIA
RYAADHQITFRDALANASALGVGPKIQAAIAQLDAVLAEASEIMLPSSGEIAPPTAVTEG
LTVLLNKSGYMDALRASRDPQDEARLENLDELIAVTREFARNNPEGTILDFLTEVALVAD
ADDLDDASGTVSLMTMHTAKGLEYDAVFVTGVEEDLIPHRISANEPGGPQEERRLFYVAL
TRARKRLHLSLAMTRAQFGEVSAAMPSRFLQEIPHDLIDWRQSPGDVNSRGGMQSRALNG
RRTGGSGGGFGGSGKRYGDDLVPLPRREKSGDIAKFANRIPAKVRDNGDLELGPGDRIKH
DDFGEGRVDAVTGEGAKRVAHVRFDSAGPKKLLIKIAPIVKL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccatcaagcccgtcatcgtcgggtccgccgcatccgcgcgccccggcgcc
tcctcgggcgagcgtcccgacgccgacctcctcgagggtctcaacccgccccagcgtgaa
gctgtgacctatcgcggcccggccctgctgatcgtcgcgggcgccggctccggcaagacg
cgggtgctcactcatcgcatcgcgtcgcttctacgcggccgagaggcgtggccgagccag
atcctcgccatcaccttcaccaacaaggctgccggcgagatgcgcgagcgcgtgcagcag
ctgatcggcgacagcgcgcagggcatgtggatctcgacgttccactcggcctgcgtgcgg
atcctccggcgcgaggcgcagcagttcggcttcaccaagaacttcacgatctacgactcg
ggcgactcgcgcgcgctcatcaagcgtctcgtgaaagagcacgaggccgacgccttcggt
ctgacccccgctggtgtccagagccgcatctcgaagctcaagaacgagctcgccgacgcc
gattcgtacgcgcgccaggcgaacatgtccgatcccgccgagcgcgtcttcgtcgaactc
ttcggcgcgtaccagtccgccctccagcgcgccaacgccttcgacttcgacgacctcatc
gcccagacggtgtacctgttccgcgcgttcccgcacgtcgccgacgtctaccgcaagcgg
ttccggcacatcctcgtcgacgagtatcaggacaccaaccacgctcagtacgcgctgatc
cacgagctgacccgtcccgttcagggacagggcggcgacgcgttctcatcgggcggcatg
atgatcttcgagcccgagtcggcccccgaggtcgaggcggcctcgctgaccgtcgtcggc
gactccgaccagtcgatctacgcgttccgcggcgccgacatccgcaacatcaccgagttc
gagcgcgactatcccggtgcgaaggtcgtgctcctcgagcagaactaccgctcgacgcag
aacatcctctcggccgcgaacgccgtcatctcgaacaacttcgaccgcaaagacaagaag
ctctggacggatgtcggcgccggcgacgcgatcgtcggcttcaccggctactcgcagcac
gacgaggcccagttcgtcgccgatgagatcgaagcgctgcaccgctcgtcggtgccgtac
tcgcagatggcggtgttctaccgcacgaactcgcagtcgcgcgcgctggaagagatcttc
atccgcgcggcgatcccgtacaagatcatgggcggcacgaagttctacgaccgtgccgag
atcaaggacgcgctggcctacgtcgtcgccgtggcgaaccccgccgacgaactggcggtg
cgccgcatcctgaaccgtccgcgtcgcgggatcggcgacgtgaccgagacgtccatcgcc
cggtacgcggccgaccaccagatcaccttccgcgatgcactcgccaacgcctcggcgctg
ggtgtggggccgaagatccaggccgcgatcgcgcagctcgacgccgtgctcgccgaggcg
tccgagatcatgctgccgagctcgggcgagatcgctccgccgacagccgtgaccgagggc
ttgacggttctgctcaacaagtcgggctacatggatgcgctgcgcgcgagccgcgacccc
caggacgaggcgcgcctcgagaacctcgacgagctcatcgcggtgacgcgcgagttcgcc
cgcaacaaccccgagggcaccatcctcgacttcctcaccgaggtcgcgctcgtcgccgac
gccgacgatctcgacgacgcctcgggaaccgtgtcgctcatgacgatgcacaccgcgaag
ggcctcgagtacgacgccgtgttcgtcacgggcgtggaagaggacctcatcccgcaccgc
atctcggcgaacgagcccggcggtccgcaggaagagcgacgcctcttctacgtcgcgctc
acccgagcgcgcaagcgcctgcacctctcgctcgccatgacccgggcgcagttcggtgag
gtctccgccgccatgccgagccgtttcctgcaggagatcccgcacgacctgatcgactgg
cggcagtcccccggcgacgtgaactcgcgcggcggcatgcagtcgcgcgcgctcaacgga
cggcggacgggtggctccggcggcggattcggcgggtcgggcaagcgctacggcgacgat
ctcgtgccgctcccgcgccgggagaagagcggcgacatcgccaagttcgccaatcgcatc
ccggccaaggtccgcgacaacggcgatctcgagctcggacccggcgatcgcatcaagcac
gacgacttcggcgagggccgggtcgacgcggtcacgggcgagggggccaagcgcgttgcg
cacgtccgcttcgattcggccggcccgaagaagctgctcatcaagatcgcaccgatcgtc
aagctgtga
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