Microbacterium paraoxydans: IZR02_03275
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Entry
IZR02_03275 CDS
T08796
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mpao
Microbacterium paraoxydans
Brite
KEGG Orthology (KO) [BR:
mpao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpao03400
]
IZR02_03275
DNA repair and recombination proteins [BR:
mpao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IZR02_03275
Archaeal homologous recombinant proteins
IZR02_03275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
QXE30545
LinkDB
All DBs
Position
704148..705317
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AA seq
389 aa
AA seq
DB search
MRILHTSDWHIGRTFHGNSTMDALAEVLAALTTQVREHEVDVVIVAGDVFDSATPSAAAY
TLLGDALVGLHETGARVVVTSGNHDSAARLGFQARLLRDGIHVLTDPLAVGTPVTIDDAH
GPVHFFGIPYLEPAIVRQHWPEGDAEGRQLRTQAQTMTHAMTLVRAGMQEHEGRSVAIAH
CFAAGVEPTEGLEREVRQGGLDVVPLRAFDGPDYVALGHIHGRQQVSERVRYAGAPLHYS
FGEQHKPRGSWLVDLDADGLAGVEWLELPVPRRLVTLTGTFEEILSAESVAAHADAWVCA
VYTDAVPQTEPMRRLREAYPHCAMVQHQPAATGEERERSYGERLRSAVTDADRIEAFLEH
VRAGQGATEVERELIREVLDDRVRAEALV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctgcacacctcggactggcacatcggccggacgttccatggcaactccacc
atggatgcgctcgccgaggtgctcgccgccctgaccacgcaggtcagggagcatgaggtg
gacgtggttatcgtcgcgggcgacgtgttcgactccgccacgccctcggccgccgcctac
accctgctcggagacgctctcgtcggtctgcacgagacgggagcgcgggtggtcgtcacc
agtggcaaccacgactccgccgcgcggctggggttccaggcccgactgctgcgcgacggc
atccacgtgctcaccgatcccctcgcggtcggcacgcccgtcacgatcgacgatgcccac
ggtcccgtgcacttcttcggtatcccgtacctggagcccgcgatcgtccgccagcactgg
ccggagggcgacgccgaggggcggcagctgcgcacgcaggcccagaccatgacgcacgcg
atgacgctcgtccgcgcgggcatgcaggagcacgagggccggtcggtcgccatcgcccac
tgcttcgccgcgggcgtggagccgacggagggtctcgagcgcgaggtgcggcagggcggc
ctcgacgtcgtccccctccgcgcgttcgacggccccgactacgtcgcactgggccacatc
cacggtcgccagcaggtgagcgagcgggtgcggtacgccggcgctccgctgcactacagc
ttcggcgaacagcacaagccgcgcggctcctggctggtcgacctggatgccgacggcctt
gcgggcgtcgagtggctggagcttccggttccgcggcgactggtcacgctgaccggcacc
ttcgaggagatcctctccgcagagagcgtggccgcgcacgccgacgcctgggtgtgcgcc
gtctacaccgacgccgtgccgcagaccgagcccatgcgacggctccgcgaggcgtacccg
cactgtgccatggtgcagcatcagcccgctgcgaccggagaggagcgcgagcggtcgtac
ggtgagcggctgcggtccgcggtgaccgatgccgaccggatcgaggcgttcctcgagcac
gtgcgcgccggccagggagccaccgaggtcgaacgcgagctgatccgcgaggtgctcgac
gaccgggtccgcgcggaagccctcgtctag
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