Microbacterium paraoxydans: IZR02_04590
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Entry
IZR02_04590 CDS
T08796
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpao
Microbacterium paraoxydans
Pathway
mpao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IZR02_04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpao03019
]
IZR02_04590
03400 DNA repair and recombination proteins [BR:
mpao03400
]
IZR02_04590
Enzymes [BR:
mpao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IZR02_04590
Messenger RNA biogenesis [BR:
mpao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IZR02_04590
DNA repair and recombination proteins [BR:
mpao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IZR02_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
KORA
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QXE30786
LinkDB
All DBs
Position
973296..975422
Genome browser
AA seq
708 aa
AA seq
DB search
MTSPTAVPLREAARAALGELVGRPDVDFHDGQFEAIEALVEGRRRALVVQRTGWGKSAVY
FVATLLRRRQGAGPTVLVSPLLALMRDQIAAAERAGVRAVAINSTNAHEWAEVQERLAGD
DVDVLLVSPERLNNPAFREEQLPALVARLGMLVVDEAHCISDWGHDFRPDYRRLRDLIAQ
MPADVPVLATTATANSRVVADVAEQLGALPGGTGGAEAVRVLTIRGPLARTSLRLGVLRL
KDSASRLAWLLSHLDDLPGSGIIYTLTVAAAVDTARFLRDHGHDVRAYTGQTDPEERAES
EGLLKRNEVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRASESADVLL
LPGVEDREIWHYFATASMPDRERAERVIAALGDSPISTPALEALVDIRRTPLELLLKVLD
VDGAVRRVQGGWVATGQPWTYDAERYERIAAERVAEQEHMLEYERTDGCRMAFLQRALDD
DTAAPCGRCDNCAGVWFPAEVAQTASAQAAASLDRVGVPVEPRRAWPTGADRLDVPVRGR
IPAGEQADEGRALARLTDLGWGGTLREIFAAGAPDAPISPALLQACVRVLAGWGWAERPV
AVVAMPSRSHPQLVDSLARGLSEIGRLPYLGALEWRGGGPSGQAGGNSVFRLAGVWDRFD
AAHLEVPAGPVLLVDDLIDSRWTLTVAARTVRQAGATAVLPFALALRG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccgaccgccgttcccctccgcgaggccgcccgcgccgccctcggcgaactc
gtcggccgtcccgacgtcgacttccacgacggccagttcgaggcgatcgaggcgctggtg
gaggggcgtcgccgcgcgctcgtggtgcagcgcaccgggtgggggaagtcggcggtgtac
ttcgtcgcgaccctgctccgccgccggcagggagccggcccgaccgtgctcgtctccccg
ctcctggcgctcatgcgcgaccagatcgccgcggccgagcgcgcgggcgtgcgcgccgtg
gcgatcaactcgacgaacgcccacgagtgggccgaggtccaggagcggctcgccggagac
gacgtggacgtcctgctcgtctcgccggagcggctcaacaacccggccttccgcgaggag
cagctgcccgcgctggtggcgcggctcggcatgctcgtcgtcgacgaggcgcactgcatc
agcgactgggggcacgacttccgtccggactaccgccgactgcgcgacctcatcgcgcag
atgcccgccgacgtgccggtgctggcgacgaccgcgacggcgaactcccgcgtggtggcc
gacgtggccgagcagctcggggcgctgccgggtggcacgggtggagcggaggcggtgcgc
gtgctcacgatccgggggccgctcgcccgtacctcgctgcggctcggggtgctccgcctc
aaggactcggcgagccgcctggcctggctgctcagccacctcgacgatctcccgggcagc
gggatcatctacacgctgacggtggcggcggcggtcgacaccgcgcggttcctgcgcgac
cacggccatgacgtgcgcgcctacacggggcagaccgaccccgaggagcgtgcggagtcg
gagggcttgctcaagcgcaacgaggtgaaggccctcgtcgcgaccagcgccctcggcatg
gggttcgacaagccggacctcgggttcgtcgtccacctcggcgcgccgtcctcaccggtg
gcgtactaccagcaggtgggacgagcggggcgtgccagcgagagcgccgacgtgctcctg
ctccccggtgtcgaagaccgcgagatctggcactacttcgcgaccgcgtcgatgcccgat
cgggagcgtgcggaacgggtgatcgcggcgctcggcgacagcccgatctcgacgccggcg
ctggaggccctcgtcgacatccgccgcacgccgctcgagctgctgctgaaggtgctcgac
gtggatggtgccgtgcgtcgggtgcagggtgggtgggtcgcgacgggacagccgtggacg
tatgacgccgaacgctacgagcgcatcgccgccgagcgggtggcggagcaggagcacatg
ctcgagtacgagcgcacggacggctgccggatggccttcctgcagcgggccctcgacgac
gacaccgcggccccgtgcggccggtgcgacaactgcgcgggcgtgtggttcccggcggag
gtcgcgcagacggcgagcgcacaggcggccgcctccctcgaccgggtgggcgtgccggtc
gagccgcgtcgcgcgtggccgacaggggccgaccgcctcgacgtgccggtgcgcggccgc
atccccgcgggagagcaggccgacgaagggcgtgccctcgcccggctcaccgacctcggc
tggggcggcacgctgcgcgagatcttcgcggcaggtgccccggacgcgccgatcagcccg
gcgctgctgcaggcctgcgtgcgcgtgctcgcggggtggggctgggcggagcggccggtg
gctgttgtcgcgatgccgtcgcggtcgcatccgcagctcgtcgactccctcgcccgcggg
ctgtccgagatcgggcggctgccctacctcggcgcgctggagtggcgcggcggagggcct
tcggggcaggcgggcgggaacagcgtgttccggctcgcgggggtgtgggaccgcttcgac
gcggcgcatctcgaggtccccgccggcccggtgctgctcgtcgacgacctcatcgacagt
cgctggaccctgacggtcgcggcgcgcacggtgcgacaggccggggccacggccgtgctg
ccgttcgcactcgccctgcgcggctga
DBGET
integrated database retrieval system
