Microbacterium paraoxydans: IZR02_06705
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Entry
IZR02_06705 CDS
T08796
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mpao
Microbacterium paraoxydans
Brite
KEGG Orthology (KO) [BR:
mpao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpao03016
]
IZR02_06705 (truB)
Enzymes [BR:
mpao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IZR02_06705 (truB)
Transfer RNA biogenesis [BR:
mpao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IZR02_06705 (truB)
Prokaryotic type
IZR02_06705 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QXE31169
LinkDB
All DBs
Position
1432682..1433575
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AA seq
297 aa
AA seq
DB search
MATPGILLVDKPGGLTSHDVVGRTRRAFGTRKVGHAGTLDPMATGLLVIGIEGATRLLTY
IVGAEKTYEATIRLGAVTSTDDAEGEILHRADESALAAIEEAAIDAGVAALTGAISQVPS
AVSAIKVDGRRAYDRVRAGEEVVLPPRDVVVSRFDVVARRRDDHAIDLDVVVDCSSGTYI
RSLARDLGAALGVGGHLTALRRTRVGPFDVRDAVTIDALEGAPVLTPAAAAGRVLSVLPV
TADEARDLRHGKRLAGQAVRLDGPLAAAIEDDGTLVGIVEKRGADVKSAMNMPEVSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccccggcatcctcctcgtcgacaagcccggcgggctgaccagtcacgatgtg
gtcggccgcacccgacgggccttcgggacccgcaaggtaggccacgccgggactctcgac
ccgatggccaccggactgctcgtcatcggcatcgagggggcgacccgcctcctcacctac
atcgtgggcgcggagaagacctacgaggcgaccatccggctcggtgccgtcacctccacg
gatgacgcggagggcgagatcctccaccgcgcggatgagagcgccctcgcggcgatcgag
gaggcggcgatcgatgccggagtggccgcgctgacgggcgcgatctcccaggtcccgagt
gcggtgtcggcgatcaaagtcgacggccgccgcgcctacgaccgcgtccgtgcgggggag
gaagtcgtcctcccgccgcgagacgtcgtcgtgtcccgattcgacgtcgtcgcgcgtcgc
cgcgacgaccacgcgatcgacctcgatgtcgtcgtggactgctcgtccggaacctacatc
cgctcgctggcccgcgatttgggtgccgccctcggtgtcggcggccacctgaccgccctc
cgccgcacccgtgtcggcccgttcgacgtgcgtgacgccgtgacgatcgacgccctcgag
ggcgctcccgtgctcacccccgccgccgccgccggccgcgtgctctccgtcctccccgtc
acggcggacgaggcgcgggacctgcgacacggcaagcgcctcgccgggcaggcggtgcgg
ctggacggcccgctcgcggccgccatcgaagacgacggcacgctcgtggggatcgtcgag
aagcgcggtgccgatgtgaagagcgccatgaacatgccggaggtctcccgatga
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