Microbacterium paraoxydans: IZR02_08800
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Entry
IZR02_08800 CDS
T08796
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mpao
Microbacterium paraoxydans
Pathway
mpao02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mpao00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IZR02_08800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpao03021
]
IZR02_08800
Transcription machinery [BR:
mpao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IZR02_08800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DBD_HTH
Pox_Ag35
Motif
Other DBs
NCBI-ProteinID:
QXE28513
LinkDB
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Position
complement(1844558..1845799)
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AA seq
413 aa
AA seq
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MTPATTKNTRTKKADQITADPEVEDVEATEAAPAPKRAAAKRAPAKKKKSDDVVEEDDAA
AAEGSEDAAGDEEEDDAKPAFTEPLPTGAIVISSKDDEEVPVYSTQITGATADPVKDYLK
QIGKVALLNAAEEVELAMRIEAGLFAEEKLSAMSPAEKTSQLGLDLQWVARDGQRAKSHL
LGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAI
TRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVVEVQK
YGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLEQLLDSLSEREAGVI
RMRFGLGDGQPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctgccacgacgaagaacacgcggacgaagaaggccgatcagatcaccgcggat
cccgaggtcgaggacgtcgaagcgaccgaagcggctcccgcgcccaagcgtgccgcggcc
aagcgcgcccccgcgaagaagaagaagtcggacgacgtcgtcgaggaagacgacgccgct
gcggccgagggctccgaagacgccgcgggcgacgaggaggaggatgacgcgaagccggcc
ttcaccgagccgctgccgaccggtgcgatcgtcatctcctccaaggacgacgaagaggtc
ccggtctactcgacccagatcaccggcgcgaccgccgacccggtcaaggactacctgaag
cagatcggaaaggtcgcactgctgaacgcggccgaagaggtcgagctcgcgatgcgcatc
gaggcgggtctgttcgcggaggagaagctctccgcgatgtctcccgccgagaagacgagc
cagctcggactcgacctgcagtgggtcgcccgtgacggtcagcgcgcgaagagccacctc
ctcggcgcgaacctccgtctcgtcgtctccctcgccaagcgctacaccggtcgcggcatg
cagttcctggatctgatccaggagggcaacctcggtctcatccgcgcggtcgagaagttc
gactacaccaagggcttcaagttctcgacctacgcgacctggtggatccgtcaggccatc
acccgcgccatggccgaccaggcccgcacgatccgcatcccggtgcacatggtcgaggtc
atcaacaagctcgcccgcgtgcagcgccagatgctgcaggacctcggtcgcgaacccact
ccggaagagctgagccgcgagctcgacatgactccggagaaggtcgtggaggtgcagaag
tacggtcgcgagccgatctccctgcacacgccgctcggcgaagacggcgacagcgagttc
ggtgacctcatcgaggacaccgaggccgtggtccccgccgatgccgtgggcttcacgatg
ctgcagcgtcagctcgagcagctcctcgactcgctctcggagcgcgaggccggcgtgatc
cggatgcgcttcggcctgggcgacggtcaaccgaagacgctcgaccagatcggtgacacg
ttcggggtgacgcgtgagcgcatccgccagatcgagtccaagacgatggccaagctgcgc
cacccgagccgctcgcagtcgctgcgggactacctcgagtga
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