Microbacterium paraoxydans: IZR02_10225
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Entry
IZR02_10225 CDS
T08796
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mpao
Microbacterium paraoxydans
Pathway
mpao03030
DNA replication
mpao03430
Mismatch repair
mpao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IZR02_10225 (dnaE)
03430 Mismatch repair
IZR02_10225 (dnaE)
03440 Homologous recombination
IZR02_10225 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpao03032
]
IZR02_10225 (dnaE)
03400 DNA repair and recombination proteins [BR:
mpao03400
]
IZR02_10225 (dnaE)
Enzymes [BR:
mpao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IZR02_10225 (dnaE)
DNA replication proteins [BR:
mpao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IZR02_10225 (dnaE)
DNA repair and recombination proteins [BR:
mpao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IZR02_10225 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QXE28778
LinkDB
All DBs
Position
complement(2121839..2125357)
Genome browser
AA seq
1172 aa
AA seq
DB search
MASDSFVHLHVHSEYSMLDGAAKINAMTQAAADYGMPAIAVTDHGNTFAAFEFYNAARNA
GIKPIVGLEAYVTPGTHRSDKTRVQWGSADQRSDDVSGSGAYTHMTMWSQSTEGMHNLFR
LSSLSSMEGYYFKPRMDRELLQTYGKGLIATTGCPSGEVQTRLRLGQYDAARAAAAEFQD
IFGKENYFAEIMDHGLSIERRVMTDLLRLAKDLGIPLVATNDSHYTHQHEADAHAALLCV
QSGSTLDDPNRFKFDGDGYYIKTAAEMRQLFRDHPEACDNTLLIAERCEVEFNTSANYMP
RFPVPEGETEDSWLIKEVEKGLHYRYPNGIPDKVRKQAEYETGIILQMGFPGYFLVVADF
INWAKDNGIRVGPGRGSGAGSMVAYAMKITDLDPLEHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIEYVTRKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGERLTKAMPPAV
MGKDMPLDGMFDSAHPRYKEASEFRALIETDPEAKTVFDRALGLEGLKRQWGVHAAGVIM
SSEPLLDIIPIMRREQDGQIVTQFDYPSCESLGLIKMDFLGLRNLTIISDALDNIRMNRG
EELDLEHLGLDDPAVYELLARGDTLGVFQLDSPPLRSLMRLMKPDNFGDISALIALYRPG
PMGANSHTNYALRKNGQQEITPIHPELAEPLAEILEESYGLIIYQEQVMAIAQKVAGFSL
GQADILRRAMGKKKKSELDKQYAGFAAGMTERGFGEGAVKALWDILLPFSDYAFNKAHSA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMALYLNECRRMGIKVLPPDVSESINF
FAAVGDDIRFGLGAVRNVGTNVVDGIVQSRKDERFTSFHHFLDTVPLHVANKRTVESLIK
AGAFDSMGDTRRALLEIHEDAVEAAVDRKRNEAQGAIGFDFDSLYDGMEEAAPAKVPPRP
EWIKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASISIHDLNNSEDLQDGDQVTVAGLV
TSVQHRVAKASGNPYGMITVEDFNGEVTVMFMGKTYLEFQHTLQQDAILAVRGRVSRRDD
GLNLHAQSAFAPDVGSFDAAGPLSLVLAEQRATERVMTELAEVLRRHSGDTEVLLRVHRG
GTAKVFEVPMPVKVSADLFGDLKSLLGPTCLG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgactccttcgtccacctgcacgtgcacagcgagtactcgatgctcgacggg
gctgcgaagatcaacgcgatgacgcaggcggccgccgattacggcatgccggcgatcgcg
gtgacggaccacgggaacaccttcgcggcgttcgagttctacaacgccgcgcgcaacgcc
ggcatcaagcccatcgtgggcctcgaggcgtacgtcaccccgggcacgcaccgcagcgac
aagacccgcgtgcagtggggctcggcagaccagcgcagcgacgacgtgtcgggttcgggc
gcgtacacccacatgaccatgtggagccagagcacggagggcatgcacaacctcttccgg
ctgagctcgctgtcgagcatggaggggtactacttcaagccgcgtatggaccgcgagctg
ctccagacgtacggcaaggggctcatcgccacgacggggtgcccgtccggagaggtgcag
acgcggctgcggctcggccagtacgacgccgcccgcgcggccgcagcggagttccaggac
atcttcggcaaggagaactacttcgccgagatcatggaccacggcctgtcgatcgagcgc
cgggtcatgacggatctgctgcgtctcgcgaaagacctcggcatcccgctcgtggcgacc
aacgactcgcactacacccaccagcacgaggccgacgcccacgcggccctgctgtgcgtg
cagtccggctccacgctcgacgacccgaaccgcttcaagttcgacggcgacgggtactac
atcaagaccgcggccgagatgcggcagctcttccgggaccacccggaggcctgcgacaac
acgctcctgatcgccgagcgctgcgaggtggagttcaacacctcggcgaactacatgccg
cggttcccggtccccgagggcgagaccgaggacagctggctcatcaaggaggtcgagaag
ggcctccactaccggtacccgaacggcatcccggacaaggtgcgcaagcaggccgagtac
gagaccggcatcatcctccagatgggcttccccgggtacttcctcgtcgtcgccgacttc
atcaactgggccaaggacaacggcatccgggtcggtccggggcgcggctccggtgcgggt
tcgatggtcgcctatgcgatgaagatcaccgacctcgaccctctcgagcacggtctgatc
ttcgagcggttcctcaacccggaccgcgtgtcgatgcccgacttcgacgtcgacttcgac
gaccgccgccgcggcgaggtcatcgagtacgtgaccaggaagtacgggtccgagcgggtc
gcacagatcgtcacgtacggcacgatcaagtcgaagcaggccctcaaggacgccggtcgt
gtcctcggcttcccgttcagcatgggggagcggctcaccaaggcgatgcccccggccgtc
atggggaaggacatgcccctcgacggcatgttcgactccgcgcacccgcgctacaaggag
gcgagcgagttccgggctctcatcgagaccgaccccgaggcgaagacggtcttcgaccgc
gcgctcggcctcgaggggctgaagcggcagtggggcgtgcacgccgccggcgtcatcatg
tcgtccgagcccctgctcgacatcatcccgatcatgcgtcgcgagcaggacggtcagatc
gtcacgcagttcgactatccgtcgtgcgagtccctcggtctgatcaagatggacttcctg
ggcctccggaaccttacgatcatctcggacgcgctcgacaacatccgcatgaaccggggc
gaggagctcgatctcgagcacctcggtctcgatgaccccgccgtctacgaactgctggcc
cgcggcgacacgctcggcgtcttccagctcgacagtccgccgctgcgctcgctgatgcgg
ctcatgaagcccgacaacttcggagacatctcggccctcatcgcgctgtaccgtcccggg
ccgatgggagccaactcccacaccaactacgcgctgcgcaagaacgggcagcaggagatc
accccgatccaccccgagctggcggagccgctcgccgagatcctggaggagtcctacggg
ctcatcatctaccaggagcaggtcatggcgatcgcgcagaaggtggccgggttcagcctc
ggtcaggcagacatcctgcgccgagcgatgggaaagaagaagaagtccgagctggacaag
cagtacgccggtttcgcggcgggcatgaccgagcgcggcttcggggagggagcggtcaag
gctctctgggacatcctcctgccgttctcggactacgccttcaacaaagcgcactccgct
gcctacgggctcgtgtcgtactggaccgcctacctcaaggcgcactacccggccgagtac
atggccgccctcctcacgagcgtcggcgactcgaaggacaagatggcgctctacctgaac
gagtgccgccggatggggatcaaggtgctcccgccggacgtctcggagtcgatcaacttc
ttcgcggccgtcggcgacgacatccgcttcggtctcggggcggtcagaaacgtcggcacg
aacgtcgtcgacggcatcgtgcagtcgcgcaaggatgagcggttcacctccttccatcac
ttcctcgacacggtgccgctgcacgtcgccaacaagcgcacggtggagtcgctcatcaag
gccggcgccttcgactcgatgggggacacccgtcgggcgctcctcgagatccacgaagac
gccgtggaggcggccgtcgacaggaagcgcaacgaggcgcagggcgccatcgggttcgac
ttcgacagtctctatgacggcatggaggaggcggcacccgcgaaggtccctccgcgtccg
gagtggatcaagaaggacaagctcgccttcgagcgcgagatgctcggcctctacgtctcg
gatcacccgctcgcgggtctcgaggtgccgctggccaagcacgcctcgatctcgatccac
gacctcaacaactccgaggacctgcaggacggcgatcaggtcaccgtggcgggcctcgtc
acgagcgtgcagcaccgtgtggcgaaggcgagcggcaacccctacggcatgatcaccgtg
gaggacttcaacggcgaggtcaccgtgatgttcatgggaaagacctacctcgagttccag
cacacgctgcagcaggatgcgatcctcgccgtgcgtgggcgcgtctcccgccgcgacgac
ggcctgaacctgcatgcccagtccgccttcgcccccgacgtcggctccttcgatgcggca
gggcccctgtcgctcgtcctcgccgagcagcgcgcgacggaacgggtcatgaccgagctg
gccgaggtgctccgacggcacagcggcgacaccgaggtgctgctccgcgtgcaccgcgga
ggcaccgcgaaggtgttcgaggtgcccatgcccgtgaaggtgtcggccgacctcttcggc
gacctcaagtcgctgctcggaccaacctgtctggggtga
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