Microbacterium paraoxydans: IZR02_12450
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Entry
IZR02_12450 CDS
T08796
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpao
Microbacterium paraoxydans
Brite
KEGG Orthology (KO) [BR:
mpao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpao03032
]
IZR02_12450 (topA)
03400 DNA repair and recombination proteins [BR:
mpao03400
]
IZR02_12450 (topA)
Enzymes [BR:
mpao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IZR02_12450 (topA)
DNA replication proteins [BR:
mpao03032
]
Prokaryotic type
DNA Topoisomerases
IZR02_12450 (topA)
DNA repair and recombination proteins [BR:
mpao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IZR02_12450 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
HC2
Cadherin
Motif
Other DBs
NCBI-ProteinID:
QXE29179
LinkDB
All DBs
Position
complement(2546691..2549567)
Genome browser
AA seq
958 aa
AA seq
DB search
MAEGKKLVIVESPTKMRSIQGYLGDGYEVLSSVGHIRDLADKKDIPAEDKKAYGKYSIDI
DNGFDPYYVVSDRKTKTVAELKRALKHADEVLLATDEDREGEAIAWHLLETLKPKVPVKR
MVFHEITKDAIQAAVGNTRELDHALVDAQETRRILDRLYGWDVSPVLWYKVKTGISAGRV
QSAATRLIVDRERERMAFVSAEYWDVDADAAATGTSFRIRLVRVDGGQLARGSDFDDTGK
LKKAVVVLDEAKAAALARAVDAAGAGTVTKVEAKPGTRSPYAPFTTSTMQQEAGRKLSMS
AKQAMSVAQRLYEKGYITYMRTDSTALSTQAVQAARSQAVALYGDNAVPLKPRVYKSKSK
NAQEAHEAIRPSGENFRTPSSLSGELDREEQRLYDLIWKRTVASQMSDAKYETTTVTIAV
EADGQTAEFTASGTVYTFKGFLEAYEEGRDEKRSDADAAENQSLPAVSVGDELAVSAAEA
KGHRTTPKPRYTEASLVKVLEEKGIGRPSTFATIPETILDRGYAVKRGQALVPTWLAFSV
VRLLEEHFAELVDYDFTAALEDDLDTIARGEQNRVEWLKSFYFGSDSHVGLRQVVDNLGE
IDARALNSTRITDTATLRFGKYGPYLEVTDPKDPEAKPRIVNVPEDLAPDELTAEKAQEL
IDAPVAGDRVLGVNPENGKVVVVKDGRFGPYVQENDPVSDDAVVDEATGEVVDLRQAQAP
SAKGKRGAKKEAAPKPRTASLFRSMSVETIDLDTALQLLSLPRVVGVDPESGDEITAQNG
RFGPYLKKGADSRSLESESQIFDVTLEQALEIYQQPKYGARRASSALAEFDADPVSGKPI
RVRDGRFGPYVTDGETNVTIPRGQTPDDITFEIAVQMLADKRAKGPSPKRGAAKKAPAKK
APAKKAPAKKTPAKASTAKKSTAAKTSTTSAARSAAAKKAAATRAANAAAKAAEKADS
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaaggcaagaagctcgtcatcgtcgagtccccgacgaagatgcggtctattcag
ggatacctcggcgacggttacgaggtgctcagctccgtcggccacatccgcgatctcgcc
gacaagaaggacatcccggccgaggacaagaaggcgtacggcaagtactccatcgacatc
gacaacggcttcgacccttactacgtggtgtcggaccgcaagaccaagacggtcgccgag
ctcaagcgcgcgctcaagcacgcggatgaggtcctgctcgccactgatgaggaccgcgag
ggcgaggccatcgcctggcacctgctggagacgctcaagcccaaggtgccggtcaagcgc
atggtcttccacgagatcaccaaggacgcgatccaggccgctgtcggcaacacccgtgaa
ctcgaccacgccctcgtcgatgcgcaggagacccgccgcatcctcgaccgcctctacggg
tgggacgtctcgcccgtgctctggtacaaggtcaagaccgggatctcggccggccgcgtg
cagtccgccgcgacccgcctgatcgtcgaccgcgagcgcgagcgcatggccttcgtctcc
gcggagtactgggacgtcgacgccgacgcggccgcgaccggcacgtccttccgcatccgc
ctggtgcgcgtggacggcggccagctcgcccgcggctccgacttcgacgacaccgggaag
ctcaagaaggcggtcgtggtcctcgacgaggcgaaggcggcggcccttgcgcgcgccgtc
gacgccgccggggcgggaaccgtcaccaaggtcgaggccaagccgggaacccgcagcccc
tacgcgcccttcacgacctccaccatgcagcaggaggcgggccgcaagctctcgatgagc
gcgaagcaggcgatgagcgtcgcccagcgcctctacgagaaggggtacatcacctatatg
cgtaccgactccacggcgctgagcacccaggcggtgcaggcggcccggagtcaggccgtg
gctctctacggcgacaacgcggtgccgctcaagccgcgcgtctacaagtcgaagagcaag
aacgcccaggaggcgcacgaggcgatccgcccgtcgggggagaacttccgcacgccgtcc
tcgctgtccggcgagctcgaccgcgaggagcagcggctgtacgacctgatctggaagcgc
accgtcgcgagccagatgtcggacgccaagtacgagacgacgaccgtcaccatcgcggtc
gaggcggacggccagacggcggagttcaccgcctccggcacggtctacacgttcaagggc
ttcctcgaggcgtacgaggagggccgcgacgagaagcgcagcgacgccgacgccgcggag
aaccagtccctgcccgcggtctccgtcggcgacgagctggccgtgtccgccgcggaggcg
aagggtcaccgcaccacgccgaagccgcgctacaccgaggcctcgctggtgaaggtgctc
gaggagaagggcatcggtcgtccctcgaccttcgccacgatcccggagaccatcctcgat
cgcgggtacgcggtcaagcgcggccaggcccttgtgccgacgtggctcgcgttcagcgtg
gtgcgtctgctcgaggagcacttcgccgagctcgtcgactacgacttcactgcagcgctc
gaggacgacctcgacaccatcgcccgcggcgagcagaaccgtgtcgagtggctgaagtcg
ttctacttcggctccgactcgcacgtgggtctgcgccaggtcgtcgacaacctcggcgag
atcgacgcccgcgcgctgaattcgacgcggatcaccgacaccgcgacgctgcgcttcggc
aagtacggcccctacctcgaggtgacggacccgaaggatccggaggccaagccgcggatc
gtcaacgtccccgaagatctcgcgcccgacgagctcacggcggagaaggcccaggagctc
atcgacgcgccggtcgccggcgaccgtgtcctcggggtgaacccggagaacggcaaggtc
gtcgtcgtcaaggacggacgcttcggcccctacgtgcaggagaacgatccggtctccgac
gacgccgtcgtcgatgaggccaccggcgaggtcgtcgaccttcgacaggctcaggcaccc
agcgcgaaggggaagcgcggcgcgaagaaggaagcggcgcccaagccccgcaccgcctcg
ctgttccgctcgatgtccgtcgagacgatcgacctcgacaccgcgctgcagctgctgagc
ctgccgcgcgtggtcggcgtcgacccggagtcgggcgacgagatcaccgcgcagaacggc
cgcttcggtccctacctgaagaagggtgccgactcccggtcgctggagagcgagtcgcag
atcttcgacgtcacgctggaacaggcgctggagatctaccagcagcccaagtacggcgcc
cgccgggcgtcgagcgcgctggcggagttcgacgccgacccggtgagcggcaagcccatc
cgtgtacgcgacggccgcttcggcccgtacgtcaccgacggtgagacgaacgtcaccatc
ccgcgcggacagaccccggacgacatcacgttcgagatcgccgtgcagatgctcgcggac
aagcgcgccaagggtccgtcgcccaagcggggagcggcgaagaaggctccggccaagaag
gcaccggccaagaaggctccggcgaagaagacgccggcgaaggcgtccacggcgaagaag
tccacggcggcgaagacgtcgaccacgtcggcagctcgctcggcggcggccaagaaggca
gcggcgacccgggccgcgaacgcggcggcgaaggcggcagagaaggcggactcgtga
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