KEGG   Microbacterium paraoxydans: IZR02_13430
Entry
IZR02_13430       CDS       T08796                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mpao  Microbacterium paraoxydans
Brite
KEGG Orthology (KO) [BR:mpao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpao03400]
    IZR02_13430
Enzymes [BR:mpao01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IZR02_13430
    5.6.2.6  RNA 3'-5' helicase
     IZR02_13430
DNA repair and recombination proteins [BR:mpao03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IZR02_13430
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII AlkZ-like DUF6406 FaeA PhoH AAA_25
Other DBs
NCBI-ProteinID: QXE29358
LinkDB
Position
2732271..2736854
AA seq 1527 aa
MSDVLDRFTPATQDWFRGAFTAPTPAQAGAWEAISAGKHALVVAPTGSGKTLSAFLWAID
SVFRERADLPEEPKKDGSRTRILYISPLKALGVDVERNLRSPLIGIGQSARRLGLTAPGI
TVGVRSGDTTSSDRRKLVSDPPDILITTPESLYLMLTSRAGDTLRDVHTVIIDEVHAVAA
TKRGAHLAVSLERLDALRRSHGAETAAQRIGLSATVRPIDEVARFLGGADPVEIVAPPAS
KTFELGVVVPMDDMTNPPPPPGAPPEAPGIDAEYTEVTGSVWPHVEEAIVDRILQNNSTI
VFANSRRLAERLTGRLNEIYAERIGVALPEPTVPAAMMAQAGSTAGADPVLAKAHHGSVS
KEQRAQVEEELKSGVLRCVVATSSLELGIDMGAVDLVIQVEAPPSAASGLQRVGRAGHQV
GEISRAALFPKHRGDVLHTAIVTERMLAGKIEAIQVPRNPLDILAQQTVAASALGAISVE
EWFETVRRSAPFQSLPRSAYEATLDLLAGRFPSDEFAELRPRLVWDRDAGTLTGRPGAQR
IAVTSGGTIPDRGLFGVFVAGESTGARVGELDEEMVYESRVGDVFTLGTTSWRIAEITHD
RVNVIPAYGQPGKVPFWHGDGIGRPFELGEALGAFSREVSAAKPEKAEQRLIAAGLDEQA
RANLLAHLSEQREATGTLPTDRTLTVERGHDEVGDWRVILHSPYGMKVHAPWALAINARV
RERLGVEGSAVASDDGIIVRIPDAESEPPGAELFVFDPDELEQLVTQEVGGSALFASRFR
ECAARALLMPRTNPNRRTPLWQQRQRSAQLLEVARRHPTFPVILETLREVLQDVYDLPSL
RKLATSIADRRIRLVETQPGQPSPFARDLLFGYVGAFMYEGDSPLAERRAAALSVDPALL
GELLGTVELRELLDPDVIAQFEREAQRLDPERRARGLEGVADLLRLLGPLDADEVAARLD
PESTGGATAATLLDDLVTARRAIPVTFAGVARVAAIEDAGRLRDALGAALPTGIPVAFLE
PLADPLGDLVARHARTHGPFTTAAVAERFGLGTAVARHTLQRLETNGRLTSGYFLPTAAG
SGDDIEWCDTEVLRRLRMRSLAAIRGSVEPVSPEAYARFLPDWQHLGRPLEGIDGVLTVI
EQFAGVPIPASAWESLVLPSRVRDYSPAMLDELTAAGEVIWSGHGTLPGRDGWVSLHPAD
LAPFTLPDPDAEIAAESLEARLLAALAAGGAYFAAQLKEMTGAENEQSVLEALWSLTWSG
HVTNDTFAPIRSLLTGGSQAHKVKRRAPRARTYRGMSLTRTAPRPASIGGRWSLLPEVET
DPARRATVTAGLLLDRYGVVTRGAVQSEGVPGGFAQAYRVLAGFEEAGHCRRGYVIEKLG
AAQFAASATVDRLRTYAGLADPPPRKAVTLAATDPANPYGAALGWPKLEGVSHRPGRKAG
GLVVLVDGALVLSLERGGRTVLCFTDDEEVLQAAAADLATTARDRRLDTLTVEKVNGEGV
YGTILGRALQEAGFVQTPRGFTLRKAV
NT seq 4584 nt   +upstreamnt  +downstreamnt
atgagcgacgtgctcgaccgcttcaccccggccacacaggactggttccggggtgccttc
accgcacccacgccggcacaggcgggggcgtgggaggcgatctccgccggcaagcacgcc
ctcgtcgtcgctccgacgggctccggcaagaccctgtcggcgttcctctgggcgatcgac
agcgtgttccgcgagcgcgccgacctcccggaggagccgaagaaggacgggtcccgcacg
cggatcctgtacatctccccgctcaaggccctcggcgtcgacgtggagcgcaacctgcgc
tcgcccctcatcggcatcgggcagtccgcgcggcgactcggtctcaccgcccccggcatc
acggtgggcgtccgctccggtgataccacgtcgagcgatcgccgcaagctcgtgtccgat
ccacccgacatcctcatcacgacgcccgagtcgctgtacctcatgctcacgagccgggcc
ggcgacaccctgcgcgacgtgcacacggtcatcatcgacgaggtgcacgcggtcgccgcc
accaagcgcggcgcgcacctcgcggtgagcctggagcgcctcgacgccctccgccgctcc
cacggcgcggagaccgcggcgcagcgcatcggcctctcggccaccgtccgcccgatcgac
gaggtcgcgcgcttcctcggcggcgccgacccggtcgagatcgtcgctcccccggcatcg
aagaccttcgagctcggcgtcgtcgtgccgatggacgacatgaccaacccgccacccccg
cccggggcgccgccggaggccccggggatcgatgcggagtacaccgaggtcaccggctcg
gtgtggccgcacgtcgaggaggcgatcgtcgaccgcatcctccagaacaactcgaccatc
gtcttcgcgaactcccgccgcctcgccgaacggctgaccggacggttgaacgagatctat
gcggagcggatcggggtcgctcttccggagccgaccgtgcccgccgcgatgatggcacag
gcggggtcgaccgccggcgccgatcccgtactcgccaaggctcaccacggctcggtgtcg
aaggagcagcgcgcgcaggtcgaggaggagctgaagtcgggggtgctccgctgcgtggtc
gccacgagcagcctggagctcggcatcgacatgggcgccgtcgacctcgtgatccaggtc
gaggcgccgccgtccgcggcctccgggctccagcgcgtgggacgggccggacaccaggtc
ggcgagatcagccgcgcggccctgttccccaagcaccgcggggacgtgctgcacaccgcg
atcgtgacggagcggatgctcgcggggaagatcgaggccatccaggtgccgcggaacccg
ctcgacatcctcgcccagcagaccgtcgcggccagcgccctcggagcgatcagcgtcgag
gagtggttcgagaccgtccgccgttccgccccgttccagtcgctcccccgctccgcgtac
gaggccacgctcgacctgctggccggccgcttcccctccgacgagttcgccgagctgcgc
ccgcgcctggtctgggatcgcgacgccggcacgctcacgggccgcccgggggcacagcgg
atcgcggtcaccagcggcggcaccatccccgaccgggggctgttcggcgtcttcgtggcc
ggcgagtccacgggcgcccgagtgggcgagctcgacgaggagatggtctacgagtcccgc
gtcggcgacgtcttcaccctgggcaccacgagctggcgcatcgccgagatcacccacgac
cgcgtcaacgtcatccccgcctacggccagcccggcaaggtgccgttctggcacggcgac
ggcatcggccgcccgttcgagctgggcgaggcgctcggggcgttctcccgcgaggtgtcc
gccgcgaagccggagaaggcggagcagcggctcatcgcggccggactcgacgagcaggcg
cgcgccaacctcctcgcgcatctctccgagcagcgggaggccacgggcaccctgccgacg
gaccgtacgctcaccgtggagcgcggacacgacgaggtcggcgactggcgcgtcatcctg
cattccccgtacggcatgaaggtgcatgcgccctgggcgctcgccatcaatgcgcgcgtg
cgggagcgtctcggcgtcgagggctccgcggtggcgagcgacgacggcatcatcgtgcgc
atccccgacgccgagtccgagccgcccggtgcggagctcttcgtgttcgatccggacgag
ctcgagcagctcgtcacgcaggaggtcggcggctcggcgctgttcgcctcgcggttccgc
gagtgcgccgcgcgggcgctgctcatgccccgcacgaaccccaaccgccgcacgccgctg
tggcagcagcgccagcgctcggcccagctcctcgaggtcgcccgccggcatcccaccttc
cccgtgatcctggagaccctgcgcgaggtgctgcaggacgtctacgacctgccgtcgctc
cggaagctcgcgacgagcatcgccgaccgccgcatccgcctcgtcgagacccagccggga
cagccgtcgcccttcgcgcgcgacctcctcttcggctacgtcggcgcgttcatgtacgag
ggcgactcgccgctggccgagcgccgagcggccgccctgtccgtcgatcccgcgctgctc
ggggagctgctgggcacggtcgagctgcgcgagctcctcgaccccgacgtcatcgcgcag
ttcgagcgcgaggcccagcgcctcgacccggagcgtcgggcgcgcggcctggagggcgtc
gccgacctgctccggctgctcgggccgctcgacgccgacgaggtggcggcacgcctcgat
ccggagtccaccggcggagcgaccgcggcgacgctgctcgacgacctcgtgaccgcgcgg
cgggccatccccgtcacgttcgccggggtggccagggtcgccgcgatcgaggacgccggg
cgcctgcgcgacgcgctcggagcagccctgccgaccggcatccccgtggccttcctcgag
cccctggcggatcccctcggcgacctcgtggcccgtcacgcccgcacccacggccccttc
accaccgcagccgtcgccgagcgcttcggtctcggcaccgcggtcgcccggcacaccctg
caacgtctggagacgaacggccgcctcacgagcgggtacttcctccccaccgcggccggc
agcggcgacgacatcgagtggtgcgacaccgaggtgctacggcggctgcgcatgcggtcg
ctcgcggcgatccgcgggtccgtcgagccggtctccccggaggcctatgcgcggttcctg
ccggactggcagcatctcggtcgacccctggagggcatcgacggcgtgctcacggtgatc
gagcagttcgccggggtgcccatcccggccagcgcctgggagtcgctcgtcctgccgtcg
cgggtgcgcgactacagcccggcgatgctcgacgagctcacggccgcgggcgaggtgatc
tggtcgggacacggcaccctccccgggcgcgacgggtgggtctcgctgcacccggccgat
ctcgccccgttcaccctgcccgatccggacgcggagatcgccgcggagtcgctggaggcg
cgcctcctcgcggccctcgcggcgggcggcgcctacttcgccgcgcagctcaaggagatg
accggcgccgagaacgagcagtcggtgctggaggccctgtggtcgctgacgtggtccggg
cacgtcaccaacgacacgttcgcgccgatccgctcgctgctgaccgggggctcccaggcc
cacaaggtcaagcgtcgcgccccgcgtgcgcgtacctatcgcggcatgtcgctcacgcgc
accgctccgcgcccggcctccatcggcggtcgctggtcgctgctccccgaggtcgagacc
gatccggcgcggcgcgcgaccgtcaccgccggactgctcctcgaccgctacggggtggtc
acccgcggagccgtgcagtcggagggcgtccccggcggattcgcccaggcgtaccgcgtg
ctggccgggttcgaggaggcggggcactgccgccgcggctacgtgatcgagaagctcggc
gccgctcagttcgccgcctccgccacggtcgaccgcctccgcacgtacgccggcctcgcc
gacccaccaccgcggaaagccgtcaccctggcggccaccgacccggcgaacccgtacggc
gcggcgctcgggtggccgaagctcgagggcgtgtcgcatcgacccggccgcaaggccggg
ggcctcgtggtgctcgtcgacggcgccctcgtcctgtcgctcgagcgcggcggacggacc
gtgctgtgcttcacggacgacgaggaggtcctgcaggccgccgccgccgacctcgcgacg
acggccagggaccgccgcctcgacacgctcaccgtcgagaaggtgaacggcgagggggtc
tacggcacgatcctcgggcgggctctgcaggaggcgggcttcgtgcagacgccgcgcggc
ttcacgctccgcaaggccgtctga

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