Methylocystis parvus: F7D14_03335
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Entry
F7D14_03335 CDS
T06304
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mpar
Methylocystis parvus
Brite
KEGG Orthology (KO) [BR:
mpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpar03016
]
F7D14_03335 (truB)
Enzymes [BR:
mpar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F7D14_03335 (truB)
Transfer RNA biogenesis [BR:
mpar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F7D14_03335 (truB)
Prokaryotic type
F7D14_03335 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QGM96611
UniProt:
A0A6B8M170
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All DBs
Position
complement(714491..715393)
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AA seq
300 aa
AA seq
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MSQRRSNRAVVDGWVVLDKPVGLTSTQAVSRLKRIYNAQKAGHAGTLDPLASGILPVAFG
EATKTVPFVQDGEKAYRFTVKWGAESNTDDSDGEITRRSDKRPERAEIERLTPQFIGDIL
QTPPQFSAIKISGQRAYDLAREGETVELKARAVTIHSLTIEACSPEETVFYMACGKGAYV
RAIARDLGRLMGCYGHVTALRRTRVGPFVEDDSYTLDEIENQKMAGEALLSVEAGLTELP
CVVVDRDTAARLRRGGSVILRGRDAPAEGVVYAACGGVPVAFGEVVEGALEPSRVFNLPF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagaagatccaatcgcgccgtcgtcgacggctgggtggtgctcgacaagccg
gtggggctgacctccacgcaggccgtctcgcgcctgaaacgcatctacaatgcgcagaag
gccggccatgccggcacgctcgatccgctggcgtcgggcattcttccggtcgccttcggc
gaagcgaccaagaccgtgcccttcgtgcaggacggcgagaaggcctatcgcttcaccgtc
aaatggggcgcggagagcaacaccgacgattccgatggcgagatcacgcgcaggagcgac
aagcggcccgagcgcgccgagatcgaacggctgacgccgcagttcatcggcgacattctg
cagacgccgccgcaattctccgcgatcaagatcagcggccagcgcgcctatgaccttgcg
cgcgagggcgagacggtggagctgaaggcgcgcgccgtcacaatccattcgctgacgatc
gaagcctgttcgccggaagagaccgttttctacatggcgtgcggcaagggcgcctatgtg
cgcgccatcgcccgcgacctcgggcgcctcatgggctgttacggccatgtcaccgcgttg
cgccgcacgcgtgtcggccccttcgtcgaggacgattcctacacgctcgacgagatcgaa
aatcagaaaatggccggcgaggctttgctctcggtcgaggcgggcctcaccgagcttcct
tgcgtcgtggtcgatcgcgatacggcggcgcggctgcgtcgcggcggctccgtgatcctg
cgcggccgcgacgcgccggcggaaggcgtggtctatgcggcctgcggcggcgtgccggtc
gctttcggcgaagtggtggaaggcgcgctggagccgtcgcgcgtgttcaacctgccgttc
tga
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