KEGG   Methylocystis parvus: F7D14_06520
Entry
F7D14_06520       CDS       T06304                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
mpar  Methylocystis parvus
Pathway
mpar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mpar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F7D14_06520 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpar03400]
    F7D14_06520 (xth)
Enzymes [BR:mpar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     F7D14_06520 (xth)
DNA repair and recombination proteins [BR:mpar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     F7D14_06520 (xth)
SSDB
Motif
Pfam: Exo_endo_phos dsDNA_bind
Other DBs
NCBI-ProteinID: QGM97165
UniProt: A0A6B8M481
LinkDB
Position
complement(1375357..1376139)
AA seq 260 aa
MRIATWNVNSVRQRLAPLLSFLKESNPDILCLQELKCEETAFPRMEVEDAGYNVVLHGQK
TFNGVAILSKSPIEESTVGLPGFDHEGQSRYIEAVVSNGDAGVFRVASIYCPNGNPPDTP
KYAYKLRFMKALTAHAFALLKLEEATVLAGDYNIIPEPRDAHDPSAWVADALFLPESRAA
YRRLLNLGYADALRAATDDAGLYTFWDYQAGAWQKNKGIRIDHLLLSPQAADRLARVEIV
KEMRAGDKPSDHVPIFAELA
NT seq 783 nt   +upstreamnt  +downstreamnt
ttgcgcatcgccacttggaacgtgaactccgtccggcagcggctcgcgccgctgctgtcg
tttctgaaggagtcgaatccggacattctctgcctgcaggaattgaaatgcgaggagacc
gcctttccgcgcatggaggtggaggatgcgggctacaacgtcgttctgcacggacagaag
acgttcaacggcgtcgccatcctctccaaatctccgatcgaggaatcgacggtcggcctt
cccggcttcgatcacgaagggcagtcacgctatatcgaagccgtggtgtcaaacggcgac
gccggcgttttccgcgtcgcgtcgatctattgccccaacggcaatccgcccgacacgccg
aaatacgcctataagctgcgtttcatgaaggcgctgacggcgcacgccttcgcgctcctg
aagctcgaggaagcgaccgtgctcgcgggcgattacaacatcattcccgagccgcgcgac
gcgcacgacccttcggcctgggtcgccgacgcgctgtttcttcccgagagccgcgccgct
tatcgacgccttctcaatctcggttacgcggatgcgctgcgcgccgcgaccgacgacgcc
gggctctatactttctgggattatcaggcgggcgcctggcagaagaacaagggcattcgc
atcgaccatctcctgctttcgccgcaggcggccgaccggctcgcccgcgtcgagatcgtc
aaggagatgcgggcgggcgataagccttccgaccatgtgccgatctttgcggagttggcg
tga

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