Methylocystis parvus: F7D14_15705
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Entry
F7D14_15705 CDS
T06304
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mpar
Methylocystis parvus
Pathway
mpar03030
DNA replication
mpar03430
Mismatch repair
mpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F7D14_15705 (dnaE)
03430 Mismatch repair
F7D14_15705 (dnaE)
03440 Homologous recombination
F7D14_15705 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpar03032
]
F7D14_15705 (dnaE)
03400 DNA repair and recombination proteins [BR:
mpar03400
]
F7D14_15705 (dnaE)
Enzymes [BR:
mpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F7D14_15705 (dnaE)
DNA replication proteins [BR:
mpar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F7D14_15705 (dnaE)
DNA repair and recombination proteins [BR:
mpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F7D14_15705 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
T2SSK
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QGM98786
UniProt:
A0A6B8M880
LinkDB
All DBs
Position
complement(3296462..3299923)
Genome browser
AA seq
1153 aa
AA seq
DB search
MRAEKAGFVHLHLHTAYSLREGALTIGKLIDLAVRDEQPALAVTDTNNLFAALEFSEKAA
KAGVQPIVGAQLRVDFGDGKPGSVSGRDDGFANVVLLAKTEAGYLNLMRVASRAYLDTAE
GDEPNVSLAALAEDAAELIALTGGPEGALDRMFAAGRPELARARFETLQEFFRDRLYVEI
QRHNLQAEREVEPQLLDLAYRRGAPLVATNEPYFASRGDFEAHDALLCIAEGTVTGVTDR
RRVSPEHYFKTRSEMLALFADLPEATANTVEIARRVSYRPRTRKPIMPRFLRDAPGDRPL
TDVEAEELRRQATEGLEARLAAHGPAEGHDREEYFRRLDFELSTIEKMGFPGYFLIVADF
IKYAKAQGIPVGPGRGSGAGSLVAYALTITDLDPLRFDLFFERFLNPERVSMPDFDIDFC
QTRRGEVIDYVRDRYGADRVAQIITFGSFLARGVLRSVGRVLEMPLGQVDKLAKLVPQNP
AKPVSLAEAVAGEQKLREAAEEDERVARLFKIAGALEGLYSNASTHAAGVVIGDRPLHEV
TPLYRDPKSDMPATQFNMKWVEPAGLIKFDFLGLKTLTVLAMAGNLARRRDPNFDLAKIP
LDDADTYAMLGRGETVGVFQLESAGMRKALVEMHADRFEDIIALVALYRPGPMANIPTYC
AVKLGDEEADYYHPKIEPILKETFGVIIYQEQVMQIAQALSGYTLGEADMLRRAMGKKIK
AEMDAQRERFVKGAVERDLTKERANFIFDLLAKFADYGFNKSHAAAYALIAYQTAWFKAH
YPAEFLAASMTFDKSQTDKLAEFRDEARRLGINVEPPSIRRSGVDFDVAPGPDGKLAIRY
ALSAIKGVGEGQAESIVRSRADRPFKSLADFASRINPREVNKKVLENLAACGAFDELEPN
RARAFGATEGVLATANRHAEDRKAGQNALFGAAEADDLVLPKVQPWPAGEVLRREYEAAG
FFLSGHPLDAYASLLPKLRVSRWVKFIADVKGGATAGRLAAVVLDRAERRTKSGSKMGIV
QLSDTTGQYEAILFSEALNQYRDALEKGAAVLVTLSASVEGDDVRARIVAVEPLAAAAAR
AQKGLRIIVGDQSPIDRIKSRLTGKGEGEVSLLIKRDVAPEEIEIRLPGAYPVNADVAAA
LREIPGVLEVEHM
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgaaaaagccggattcgtccaccttcatctgcataccgcctattcgcttcgc
gaaggcgcgctcaccatcggcaagctgatcgaccttgcggtccgggacgagcagccggcg
ctcgccgtaacggacacaaacaatcttttcgcggcgctcgaattttcggagaaggcggcg
aaggccggcgttcagcccatcgtgggcgcgcagcttcgggttgatttcggcgacggcaag
ccggggagcgtgtcgggccgggacgacggcttcgccaatgtcgtgctgctcgccaagacc
gaagccggctatctcaatctcatgcgcgtcgcctcccgcgcctatctcgacacggcggag
ggagacgagccgaatgtctcgcttgccgccctggccgaagacgccgcggagctgatcgct
ctgacaggcgggccggaaggcgcgctcgaccgcatgttcgccgccggccgcccggagctg
gcgcgcgcccggttcgaaacgcttcaggagttttttcgggaccgactctacgttgaaatt
caacgtcataatcttcaagctgaacgtgaggtggagcctcagcttctcgatctggcctat
cgccggggcgcgccgctggtcgcgaccaacgagccctatttcgcgtcccggggcgacttc
gaggcccatgacgcgctgctctgcatcgccgagggaaccgtcaccggcgtgacagatcgt
cggcgcgtctcccccgagcattatttcaagacgcgctccgaaatgctggcgctgttcgcg
gacctgccggaagcgacagccaatacggtcgagatcgcccggcgcgtgagctatcgcccg
cgcacccgcaagccgatcatgccgcgcttcctgcgcgacgcccccggcgaccggccgctg
accgatgtggaggcggaagagttgcgccggcaggcgacggaggggctcgaagcccggctc
gcggcgcatggcccggccgagggccacgaccgcgaggaatatttcaggcgcctcgacttc
gagttgagcacgatcgagaagatggggtttcccggctacttcctgatcgtggccgacttc
atcaaatacgccaaggcgcagggcattccggttgggccgggccgcggttcgggcgcgggc
tcgctggtcgcctacgccctgaccatcacggatctcgatccgctccgcttcgacctcttc
ttcgagcgcttcctgaaccccgaacgcgtctcgatgccggatttcgacatcgacttctgc
cagacaaggcgcggcgaggtgatcgactatgtgcgcgaccgctacggcgcggaccgcgtg
gcgcagatcatcaccttcggctccttcctggcgcgcggcgtgctccgcagcgtcggtcgc
gtgctggaaatgccgctgggacaggtggacaagctcgccaagctcgtgccgcagaatccg
gccaagcccgtcagcctcgcggaagcggtcgccggcgagcaaaaattgcgcgaggcggcg
gaagaggacgagcgcgtcgcgcggctcttcaaaatcgccggcgcgctggaggggctatac
tccaacgcctcgacccacgccgccggcgtcgtgatcggcgaccggccgcttcacgaggtg
acgccgctctatcgcgacccgaaatcggacatgccggcgacccagttcaacatgaaatgg
gtcgagccggcaggcctgatcaaattcgactttctgggcctcaagacgctgaccgtgctc
gccatggcgggcaacctcgcgcgccgccgcgacccgaactttgatctcgccaaaatcccc
ctcgacgacgcggacacctacgccatgcttgggcgcggcgagacggtgggcgtgtttcag
cttgaaagcgcgggcatgcgcaaggcgctggtcgaaatgcacgccgatcgtttcgaggac
atcatcgccctcgtcgcgctctatcggccgggccccatggccaatatcccgacctattgc
gcggtgaagctcggggacgaggaggccgactactaccaccccaagatcgagcccattctg
aaggagaccttcggcgtcatcatctatcaggagcaggtgatgcagatcgcccaggcgctc
tcgggctatacgctcggcgaggccgacatgctccgccgcgccatgggcaagaagatcaag
gcggagatggacgcgcagcgcgagcgcttcgtgaagggcgccgtcgagcgggatctgacg
aaggaacgcgccaatttcattttcgaccttctcgcgaaattcgcggattacggcttcaac
aagtcgcacgccgccgcctatgcgctgatcgcctaccagacggcctggttcaaggcgcat
tatccggcggagttcctcgccgcctcgatgaccttcgacaagagccagaccgacaagctg
gccgaattccgcgacgaggcgcgccggctcggcataaatgtcgagccgccctcgatcagg
cgctcgggcgtggatttcgacgtggcgcccgggccggacggcaagctcgccatccgctac
gcgctttccgccatcaagggggtgggcgaggggcaggcggagtcgatcgttcgctcccgc
gccgacaggccgttcaaaagtctcgccgacttcgccagccgcatcaatccgcgcgaggtc
aacaagaaggtgctggagaatctcgcagcctgcggcgccttcgacgaattggagcccaac
cgcgcccgcgctttcggagcgacagagggcgtactcgcgaccgccaaccgccatgccgag
gatcgcaaggcgggacagaacgcgcttttcggcgccgccgaggccgacgacctcgttctg
cccaaggttcagccctggccggccggcgaggtcctacgccgggaatatgaggcggcggga
tttttcctttcgggccacccgctcgacgcctatgccagtctcctacccaaattgagggtg
tcgcgctgggtgaaattcatcgccgacgtgaagggcggagcgaccgcgggacgcctcgcc
gccgtggttctggaccgcgccgagcgccgcaccaagtcgggttcgaagatgggcatcgtc
caattgtcggacacgaccggtcagtatgaggccatccttttctcggaggcgctcaaccag
taccgcgacgcgctggagaagggcgccgccgttctcgtgaccctttccgcctcggtcgag
ggcgacgacgtgcgcgcccgcatcgtcgcggtcgagcctttggccgccgcagcggcgcgc
gcgcagaagggattgcggattatcgtcggagatcaaagtccgattgataggataaaaagc
aggctaacgggaaagggggagggcgaagtctctctcctgatcaagcgcgacgtcgccccc
gaggagatcgagatccggctacccggcgcctatccggtcaatgccgacgtcgccgccgcg
ctgagagaaattcccggcgttctggaggtggagcatatgtga
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