Methylocystis parvus: F7D14_17720
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Entry
F7D14_17720 CDS
T06304
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mpar
Methylocystis parvus
Brite
KEGG Orthology (KO) [BR:
mpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpar03016
]
F7D14_17720 (rnd)
Enzymes [BR:
mpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
F7D14_17720 (rnd)
Transfer RNA biogenesis [BR:
mpar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F7D14_17720 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGM99144
UniProt:
A0A6B8M588
LinkDB
All DBs
Position
3695700..3696950
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AA seq
416 aa
AA seq
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MTLLTTTDELAAVCERFSRHPFVTVDTEFLRETTFWPKVCVIQIASPQEAVAIDTLADNI
DLSPFFELMADPQVVKVFHAARQDLEIIWRLARLIPAPLFDTQVAAMVCGFGEQASYLEL
VKSITRANLDKSSRFTDWSRRPLSPAQIDYAIADVTHLRDIYATLRARLEKSNRLDWLAD
EMETLTSPATYEQHPENAWERLRHRARKPRDLAVLMELAAWREAEAQSRDVPRSRVLKDD
VLIEVAQSAPRSPEALGNLRSFPKGMERSRAGADIIAAVERGVARDPESIPKIERERRGS
NGATVELLKVLLRQVTEQSGVAAKMIATVEDLEAIANDDRADVPALRGWRRAIFGEKALE
LKRGRLALAVENGKVVTFDWHDAESQAASAPIRAEPPVAASADAPVNSPAEASASG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacccttttgaccacaacagacgaactggccgccgtttgcgagcgcttctcgcgtcac
ccctttgtgaccgtcgatacggaatttttgcgtgagacgaccttctggcccaaagtctgc
gtaatccagatcgcctcgccgcaggaggcggtggccatcgacacgctcgcggacaatatt
gatttatcgccttttttcgagctgatggccgatcctcaggtcgtgaaggttttccatgcc
gcgcggcaggatctcgaaatcatctggcgtttggcgcggctgatcccggcccccctgttc
gacactcaggtggcggccatggtctgcggcttcggcgagcaggcctcctatctggagctc
gtcaagtcgatcacgcgggcgaatctcgacaaatcgtcgcggttcaccgactggtcccgc
cggcccctctctcctgcgcagattgactatgcgatcgcggacgtcacccatttgcgggac
atctatgcgacgctccgcgcccggctggaaaagtccaaccgtctcgactggctcgcggac
gagatggagacgcttacgtcgccggccacctatgagcagcacccggaaaacgcctgggag
cggctccgccatcgcgcccgcaagccgcgcgatctcgccgtgctgatggagctcgccgcc
tggcgcgaagccgaggcgcagagccgcgacgtgccgcgttcgcgcgtgctcaaggacgac
gtgctcatcgaggtggcgcagtcggccccgcgcagccccgaggcgctcggcaatctgcgg
tccttccccaaaggcatggagcgttcgcgcgccggcgccgacatcatcgcggctgtcgag
cgcggagtcgcgcgcgatccggagagcattccgaaaatcgagcgcgagcggcgcggttcg
aacggcgcgacggtcgaactgctcaaagtgctgctgcgtcaggtgacggagcagtccggc
gtggccgccaagatgatcgcgaccgtcgaagatctcgaggccatcgccaatgacgaccgc
gcggacgtgccggccctcaggggttggcggcgcgccatcttcggagaaaaggcgctggag
ctgaagcgcggccggctggcccttgcggtagagaacggcaaggtcgtcactttcgactgg
catgacgccgagtcgcaagcggccagcgcgcccatccgcgccgaaccgcctgtcgcggcg
agcgccgacgcgcccgttaattcgccagccgaagcgtccgcctcgggctga
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