Methylocystis parvus: F7D14_19585
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Entry
F7D14_19585 CDS
T06304
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mpar
Methylocystis parvus
Pathway
mpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F7D14_19585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpar03400
]
F7D14_19585
Enzymes [BR:
mpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F7D14_19585
DNA repair and recombination proteins [BR:
mpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F7D14_19585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
AAA_29
nSTAND3
HHH_2
NTPase_1
MeaB
PIF1
AAA_16
RsgA_GTPase
UvrD-helicase
AAA_22
AAA_28
Helicase_RecD
DEAD
ABC_tran
T2SSE
NACHT
CbiA
cobW
AAA_25
AAA_18
AAA_23
NPHP3_N
AAA_17
AAA
AAA_24
TrwB_AAD_bind
ATP_bind_1
SMC_N
Motif
Other DBs
NCBI-ProteinID:
QGM99814
UniProt:
A0A6B8M6U8
LinkDB
All DBs
Position
unnamed1:complement(11695..13929)
Genome browser
AA seq
744 aa
AA seq
DB search
MAACYNSGATAPPRKLRLQPSANSTPPKETLVGSVERVTFHNEDNGFAVLKVKARGKRDL
VPVVGHVASISAGEFIHAVGVWTTDRAHGLQFKADFLKTTPPTTAEGIEKYLGSGMVRGI
GPVLAKRIVAAFGEKTFEIIEAEPERMREVSGIGEFRAGKIVAGWAEQKAVRDIMVFLHA
NGVGTSRAVRIFKTYGHDAIQVMTENPYRLARDIRGIGFKTADAIAMKLGMARDAPQRVR
AGISYALQEAMDEGHCGLPVEELVKLTVTLLDVDERIVQSALKAELADGEVVADAIEGKP
CVFLRGLHLAERGAADRLLALARGASPWPTIDAAKAIPWVEARTGKTLAASQRAAVETVL
ASKVAVVTGGPGVGKTTLLDAILRILAAKGTKLLLAAPTGRAAKRMADQTGLEAKTIHRL
LETDPKNGGFRRDADNPLDCDLLVLDETSMVDATLMFSVLKAIPPRAGLLLVGDVDQLPS
VGPGQVLADVIASGALPVARLTEVFRQAAESRIVVNAHRINRGEMPEWPKREETSDFYFV
EAGDPEKGAAKVVEIVRDRIPRRFGLDSIADVQVLCPMQRGALGARSLNADLQKALNPNM
AERVERFGSTFAPGDKVMQTENDYDREVFNGDLGRILRIDQADGILWVDFDGREVEYPFG
ELDTLVPAYATTIHKSQGSEYPAVVITLATQHYTMLARNLVYTAVTRGKRLVVIVGQRRA
LAIAVRTHGRKRRWTKLKEWLTAT
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgctataatagcggcgccacagctcctcctcggaaactccgtttgcagcct
tcagccaactcgaccccgcccaaggaaaccctcgtcgggtccgtcgagcgggtgaccttc
cacaacgaagacaacggcttcgcggtcctgaaggtgaaggcacggggcaagcgagatctg
gtcccggtcgtcgggcatgtcgcctcgatctcggccggcgagttcatccacgccgtcggc
gtctggaccaccgaccgcgcgcacgggctacagttcaaggcggacttcctcaagacgacg
ccgccgacgactgcggagggcatcgagaagtatctcgggtccggcatggtgcggggcatc
ggaccggtgctcgccaagcggatcgtcgccgccttcggcgagaagaccttcgagattatc
gaggctgagcccgaaaggatgcgggaggtctcgggcatcggcgaattccgcgccggtaaa
attgtcgccggctgggccgagcagaaggcggtgcgcgacatcatggtcttcctgcacgcc
aatggcgtcggcacgtcgcgggccgttcgtatcttcaagacctatggccacgacgccatc
caggtcatgacggaaaatccttacaggctggcgcgggacatccgcgggatcgggttcaag
accgccgacgccatcgccatgaagctgggcatggcgcgggatgcgccgcagcgggtccgg
gcggggatttcctacgcccttcaggaggcgatggacgaaggccactgcggcctgccggtg
gaggagctggtcaagctcaccgtcacactgctcgatgtcgacgagcgcatcgtccagagt
gcgctgaaagcggaactcgccgatggcgaggtcgtcgccgatgcgatcgaggggaaaccc
tgcgtgttcctgcgcggcctgcacctcgccgagcgcggcgccgccgaccggctgttggcc
ttggcccgaggggcgtcgccgtggccgacgatcgacgccgcgaaggccatcccctgggtc
gaggcgcgaaccggaaagacgttggcggcctcgcagcgcgccgccgtcgagacggtcctg
gcctcgaaggtcgccgtcgtgacaggcggccccggcgtcggcaagacgacgctgctcgac
gccatcctccgcatccttgccgccaagggaacgaagctcctcctggcggcccccaccggt
cgcgccgccaagcgtatggccgaccagaccggcctcgaagccaagaccatccatcgcctg
ctggagaccgacccgaagaacggcgggttccgccgcgacgccgacaatcccctcgactgc
gatctccttgtcctcgatgagacaagcatggtcgacgcgacgctgatgttttcggtgctc
aaggcgatcccgccgcgggccgggctgctgctcgtcggcgacgtggaccaactcccctcg
gtcgggccggggcaggtactcgccgacgtcatcgcctccggcgcgctgccggtcgcgcgg
ttgaccgaggtcttccggcaggcggcggagagtcggatcgtcgtcaacgctcaccgcatc
aaccgcggagagatgccggaatggcccaagcgcgaggagacgtccgatttctatttcgtc
gaggccggcgatccggaaaagggcgcggccaaggtcgtcgagatcgtccgggaccgcatt
ccccggcgctttggcctcgattccatcgccgacgtgcaggtcctctgcccgatgcagcgt
ggcgccctcggcgcccggtcgctcaacgccgatctccagaaggccctcaacccgaacatg
gccgagagggtcgagcgcttcgggtcgaccttcgcgcctggcgataaggtgatgcagacg
gagaacgactacgaccgcgaggtgttcaacggcgatctcgggcgcatcctccgcatcgat
caggccgacggcatcctgtgggtcgatttcgacgggcgcgaggttgaatatccgttcggc
gaactcgacacgctggttcccgcctatgcgacgacgatccacaagtcgcagggctccgaa
tatcccgccgtcgtcatcaccctcgcgacccagcactacacgatgctggcgcgcaacctc
gtctacacggcggtcacgcgcggcaagcgccttgtcgttatcgtcgggcagcggcgcgcc
ctcgccatcgccgtgcggacacacgggcggaagcggaggtggacgaagctgaaggagtgg
ctcacggcgacatga
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