Mycolicibacterium parafortuitum: MPNTM1_00117
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Entry
MPNTM1_00117 CDS
T11082
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpat Mycolicibacterium parafortuitum
Pathway
mpat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPNTM1_00117 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpat03021
]
MPNTM1_00117 (rpoA)
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_00117 (rpoA)
Enzymes [BR:
mpat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPNTM1_00117 (rpoA)
Transcription machinery [BR:
mpat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPNTM1_00117 (rpoA)
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPNTM1_00117 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCI59007
LinkDB
All DBs
Position
complement(127646..128698)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEEVIAENRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKNSISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADQAAHFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPASFDPSEVAGYDVATGTWNSDAGYDLDDNQDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgccccaccctgagcgaagaggtcatcgccgagaaccgctcccag
ttcgtcatcgaaccgctggagcccggattcggctacaccctcggaaactcgctgcgccgc
acgctgctgtcgtccatcccgggcgcggccgtgaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgtccccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aagggcctggtcgtgtcgtccgaagaggacgagcccgtcacgatgtacctgcgcaagcag
ggcccgggtgaggtcaccgcgggcgacatcgtcccgccggccggtgtcacggtgcacaac
cccgacatgcacatcgccaccctgaacgacaagggcaagctcgaggtcgagctcgtcgtc
gagcggggccgcggctacgtgcccgcggtgcagaacaaggcctccggcgccgagatcggc
cggatcccggtcgactcgatctactcgccggtcctcaaggtcacctacaaggtggaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagaac
tcgatcagcccgcgtgacgcgctggcgtcggcgggtaagaccctggtcgaactgttcggt
ctggcacgggaactcaacgtcgaggccgagggcatcgagatcggcccgtcgccggccgaa
gccgatcaggctgcgcacttcgcgctgccgatcgacgatctggacctgacggtgcggtcg
tacaactgcctcaagcgcgagggcgtgcacaccgtgggcgaactggtcgcccgcacggag
tccgatctgctggacatccgcaacttcggccagaagtccatcgacgaggtgaagatcaag
ctgcaccagctgggtctgtcgctcaaggacagccccgccagcttcgatccgtccgaggtg
gccggctacgacgtggccacgggcacctggaacagcgatgccggctacgacctggacgac
aaccaggactacgcagaaaccgaacagctctaa
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