Mycolicibacterium parafortuitum: MPNTM1_00294
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Entry
MPNTM1_00294 CDS
T11082
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mpat Mycolicibacterium parafortuitum
Pathway
mpat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MPNTM1_00294 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_00294 (recD)
Enzymes [BR:
mpat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MPNTM1_00294 (recD)
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MPNTM1_00294 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
RecD_N
UvrD-helicase
Helicase_RecD
SH3_13
PhoH
AAA_28
AAA_16
AAA_25
TrwB_AAD_bind
nSTAND3
TraI_hel_assoc_N
NTPase_1
Herpes_Helicase
AAA_5
UvrD_C
SLFN-g3_helicase
CbiA
SRP54
NACHT
AAA
DEAD
Motif
Other DBs
NCBI-ProteinID:
XCI59180
LinkDB
All DBs
Position
308101..309777
Genome browser
AA seq
558 aa
AA seq
DB search
MSIDAFTELFEPADIHVAHRLTALGKDDDARVALAVALAVRALRSGSVCVDLRAVADQIA
VPGLPWPDPREWLAAVAASPLTDAKVLRLYSDSSADLLYLDRYWREEEQVCDDVTALLAA
PPRTAVPSIARLFPAGWEEQRAAAEAALTQSLTVLTGGPGTGKTTTVARLLAAIAEQADV
AGRPAPRMALAAPTGKAAARLQDAVAAEVAKLTDVDRGRLSGLRATTLHRLLGSRAGTSS
RFRHHRGNRLPHDVIVVDETSMVSLTMMARLLEAVRPDARLLFVGDPDQLASVDAGAVLA
DLVDGLGSAGVVELKTSHRFGETIGALAVAIRGGDADAVIEVLRAGGDAIGWLDTDDASG
ALRTPLVDRAADLRQAALLGDAAAALDVLDGHRLLCAHRRGPFGVTHWNRQIERWLAERT
GQSVWSPWYPGRPLLVTANDYGLGVYNGDTGVVVAAPDGLRAHIGSASASRQLAPGRLGE
VETMFAMTIHKSQGSQADEVTVLMPPEDSRLLTRELFYTAVTRAKKRVLVAGTEASVRAA
VDRRAVRASGLARRLTSR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgacgcgttcaccgaactgttcgaaccggccgacatccatgtcgcgcaccgg
ctgaccgcgctgggcaaggacgacgacgcccgcgtcgcgctcgcggtcgcgctggcggtg
cgcgcgctgcgcagcggatcggtgtgcgtggacctgcgcgcggtcgccgaccagatcgcc
gtgcccggcctgccgtggccggatccgcgggagtggctcgccgcggtggcggccagcccg
ctgaccgacgcgaaggtgctgcggttgtactcggactcctcggcggatctgctctacctc
gaccgctactggcgcgaagaggaacaggtgtgtgacgacgtcacggcgctgctggcggcg
ccgccgcgcaccgcggtgccgagcatcgcgcggctgttcccggccggctgggaggagcaa
cgcgccgccgccgaggccgcgctgacgcagtcgctgaccgtactgaccggcggccccggc
accggcaagaccaccaccgtcgcgcggctgctggcggcgatcgccgagcaggccgacgtg
gccggccggcccgcgccccggatggcgctggccgcaccgaccggcaaggccgccgcgcgg
ctgcaggacgcggtcgcggccgaggtcgccaagctcaccgacgtcgatcggggccggctg
tccgggctgcgcgccaccacgctgcaccggctgctcggcagccgggccggcacgtcgtcg
cggttccgccaccatcgcggtaaccggttgccgcacgacgtgatcgtcgtcgacgagacc
tcgatggtgtcgctgacgatgatggcgcggcttctcgaggccgtccgtccggatgcccgg
ctgctgttcgtcggcgaccccgatcagctggcgtcggtggacgccggggcggtgctcgcc
gatctggtggacggactcggcagcgccggggtggtggagctcaagacgtcgcaccggttc
ggcgagacgatcggcgcgctggccgtcgcgatccgcggcggcgacgccgacgcggtgatc
gaggtgctgcgcgccggcggtgacgcgatcgggtggctggacaccgatgatgcttcaggc
gcgttgcgcaccccgctggtggaccgggccgccgacctgcggcaggcggctctgctcggc
gacgcggccgccgcgctcgacgtcctcgacgggcaccggctgctgtgcgcgcaccggcgc
gggccgttcggggtcacgcactggaaccggcagatcgaacgctggctggccgagcgcacc
gggcagtcggtctggtcaccctggtatccgggccgcccgctgctggtgacggccaacgac
tacgggctcggggtgtacaacggcgacaccggcgtcgtcgtcgcggcgccggacgggctg
cgcgcccacatcgggtcggcctcggcgtcgcggcagctggcgccgggccggctcggcgag
gtcgagacgatgttcgcgatgaccatccacaagagccagggcagccaggccgacgaggtc
accgtgctgatgccgccggaggactcgcggctgctgacccgtgagctgttctacaccgcc
gtcacccgcgcgaagaagcgcgtcctcgtcgccgggacggaggcctcggtgcgcgccgcg
gtggaccggcgcgcggtccgcgcctccgggctggcccgccggctcaccagccgctga
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