Mycolicibacterium parafortuitum: MPNTM1_01724
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Entry
MPNTM1_01724 CDS
T11082
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mpat Mycolicibacterium parafortuitum
Pathway
mpat03030
DNA replication
mpat03430
Mismatch repair
mpat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPNTM1_01724
03430 Mismatch repair
MPNTM1_01724
03440 Homologous recombination
MPNTM1_01724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpat03032
]
MPNTM1_01724
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_01724
Enzymes [BR:
mpat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPNTM1_01724
DNA replication proteins [BR:
mpat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPNTM1_01724
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPNTM1_01724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_19
AAA_30
AAA_16
AAA_5
DnaX_C
Rad17
Mg_chelatase
TmcA_N
AAA_14
AAA_18
Motif
Other DBs
NCBI-ProteinID:
XCI60595
LinkDB
All DBs
Position
1816071..1818050
Genome browser
AA seq
659 aa
AA seq
DB search
MALYRKYRPATFAEVVGQEHVTEPLSTALNSGRINHAYLFSGPRGCGKTSSARILARSLN
CAQGPTATPCGVCDSCVALAPNGPGNMDVTELDAASHGGVDDTRELRDRAFYAPAQSRYR
IFIVDEAHMVTTAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPK
TMRTLIEKIVASENVTVDDAVYPLVIRAGGGSPRDTLSVLDQLLAGAQGNHVAYQRALSL
LGATDLALIDEAIDALAANDSAALFGAVEGVIDAGHDPRRFATDLLERFRDLIVLQAVPD
AVARGVVDGPEDVLERMREQASQLGTATLTRFAEVVHAGLGEMRGATAPRLLLEVMCARL
LLPSASDTEAALLQRVERIETRLDLSIPASDEIATSTQAPPRKQFVRRSEAASASTPAPE
PEPVPPAAPVPPRRPEPEPAPRVAAPEQVPAPPQPAAPSPEPTPPAPAQPPRQAPAAQAA
PAAPPPPVRQPAAPAVEAPPATPAAAVAAGEPNAAAVRSMWPTVREKVRERSRTTEVMLA
GAIVRAVEGDTLMLTHESAPLARRLCEQRNADVIREALKDALGVNWKVVCEPGTAAAPAP
ARPEPTRAPAEPPPSPDGDDEESMLAEASTIDPAAPRRDPEEAALELLQNELGARRIDG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtggctctctaccgtaagtaccggccggcgacattcgccgaagtcgtgggccaggaacat
gtcaccgagccgctgtcgacggcgttgaactcaggccgtatcaaccacgcctacctgttc
tccgggccacgtggctgcggcaagacctcgtcggcgcgcatcctggcccgctcgctgaac
tgcgcgcagggcccgacggccacgccgtgcggggtgtgcgactcgtgcgtcgcgctggcc
ccgaacgggcccggcaacatggatgtcaccgaactcgacgcggccagccacggcggtgtg
gacgacacccgtgaactgcgggaccgcgcgttctacgcgccggcccagtcgcgctaccgg
atcttcatcgtcgacgaggcgcacatggtcaccacggccggcttcaacgcgctgctcaag
atcgtcgaggagccacccgagcacctgatcttcgtgttcgcgaccaccgaacccgagaag
gtgctgccgaccatccggtcgcgcacccaccactacccgttccggctgctggcgccgaag
acgatgcgcacgctgatcgagaagatcgtcgcgtccgagaacgtgaccgtcgacgacgcg
gtctatccgctggtgattcgtgccggcggcggttcaccccgcgacaccctcagcgtgctc
gaccagctgctggcgggcgcccagggcaatcatgtcgcctaccagcgcgcgctgtccctg
ctgggggccaccgacctggcgctgatcgacgaggccatcgacgcgctcgcggccaacgac
tccgcggcgctgttcggcgccgtggagggggtcatcgacgccgggcacgacccgcgccgc
ttcgccaccgatctgctggaacggttccgcgacctgatcgtgttgcaggccgtgcccgac
gctgtcgcgcgcggcgtggtggacggacccgaggacgtgctggagcggatgcgtgaacag
gcctcgcagctgggcaccgcgacgctgacccgcttcgccgaggtggtgcacgccgggctc
ggcgagatgcgcggcgcgaccgcgccccggctgctgctcgaggtgatgtgcgcgcggctg
ctgctgccgtcggccagcgataccgaggcggcgctgctgcagcgcgtcgaacgcatcgag
acccggctggacctgtcgatcccggccagcgacgagatcgccacgagcacccaggcgccc
ccccgcaagcagttcgtccgcaggagcgaagccgcgtcggcgtccacccccgcgcccgag
ccggaacccgtgccgccggccgcgcccgtcccgccgcgccggcccgagcccgaaccggcg
ccgagagtcgccgcgcccgagcaggttccggcaccaccacagccggccgcaccgtcacct
gagccaacgccacctgcgccagctcagccgccccggcaggcaccagctgctcaggctgca
cccgctgcgccacccccaccggtgcgccagcccgccgccccggccgtcgaggcgccgccg
gcgaccccggccgccgccgtcgcggcaggcgaacccaatgcggccgcggtgcgcagcatg
tggccgacggtgcgggagaaggtgcgcgagcgtagccgcaccaccgaggtgatgctcgcg
ggcgcgatcgtgcgtgcggtcgagggagacaccctgatgctgacccacgaatcggcgccg
ctggcccggcggttgtgcgaacagcgcaacgccgacgtgatcagggaagcgctcaaagac
gccctcggcgtgaactggaaggtggtgtgcgagccgggaaccgcggccgcacccgcgccg
gcgcgccccgagccgacccgcgcgcccgccgagcctccgccatccccggacggcgacgac
gaggagagcatgctggccgaggccagcacgatcgatccggctgctccgcgccgcgatccc
gaggaagcggcgctggagttgctgcagaacgaactgggcgcgcgccgaatcgacggctga
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