Mycolicibacterium parafortuitum: MPNTM1_02385
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Entry
MPNTM1_02385 CDS
T11082
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpat Mycolicibacterium parafortuitum
Pathway
mpat03420
Nucleotide excision repair
mpat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPNTM1_02385 (pcrA)
03430 Mismatch repair
MPNTM1_02385 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_02385 (pcrA)
Enzymes [BR:
mpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPNTM1_02385 (pcrA)
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPNTM1_02385 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MPNTM1_02385 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
XCI61246
LinkDB
All DBs
Position
2497271..2499628
Genome browser
AA seq
785 aa
AA seq
DB search
MSVHLTLNDATPMTGDDLLEGLNPQQRQAVLHEGTPLLIVAGAGSGKTAVLTRRIAYLLA
ARDVGVGQVLAITFTNKAAAEMRERIVGLVGPRARNMWVSTFHSTCVRILRNQASLLPGL
NSNFSIYDADDSRRLLLMIGKDMGLDTKRHSPRLLANAISNLKNELIGPAQAAAEASEAA
DDLARIVADVYGEYQRRLRAANALDFDDLIGETVAVLQAFPQIAQYYRRRFRHILVDEYQ
DTNHAQYVLVRELVGTAGADDDPAGVPPAELCVVGDADQSIYAFRGATIRNIEDFERDFP
NATTILLEQNYRSTQTILNAANSVISRNTGRREKRLWTDAGEGELIVGYVADNEHDEARF
VAQEIDSLSDSIPGFSYNDVAVFYRTNNSSRAIEEVFIRAGIPYKVVGGVRFYERKEIRD
IVAYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVHAENTGLNFNDALVAAAEGRVP
MLNTRSEKAIAGFVALLDELRGGLDGELGDLVETVLDRTGYRAELEASSDPQDLARLDNL
NELVSVAHEFSTDLANARALADGDDAQGPDTADEDVPDTGVLAAFLERVSLVADADDIPE
HGSGVVTMMTLHTAKGLEFPVVFVTGWEDGMFPHMRALGDPTELSEERRLAYVGITRARQ
RLYLSRAKVRSSWGQPMLNPESRFLREIPQELIDWRRTEAPASSFSAPVGNAGRYGTPRP
SPTRPAAGKRPLIVLEPGDRVTHDKYGLGRVEEVSGAGESAMSLIDFGSAGRVKLMHNHA
PISKL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacctgacgctgaacgacgccacgccaatgaccggcgacgacctgctcgaa
ggcctgaacccgcagcaacgccaagcggtgctgcacgagggcaccccgctgctgatcgtc
gcgggcgcaggctcgggcaagacggcggtgctgacgcggcgcatcgcgtacctgctggcc
gcgcgcgacgtcggtgtcgggcaggtgctggcgatcaccttcaccaacaaggcggccgcc
gagatgcgcgagcgcatcgtcgggcttgtcggcccgcgggcgcgcaacatgtgggtttcg
acgttccactcgacctgtgtgcggatcctgcgtaaccaggcctcgctgcttcccgggctg
aactccaacttctcgatctacgacgccgacgactcgcgccggctgctgctgatgatcggc
aaggacatgggcctggacaccaagcggcattcgccgcggctgctggccaacgcgatctcg
aacctgaagaacgagctgatcggccccgcccaggcggccgccgaggcctccgaggccgcc
gacgatctggcccgcatcgtcgccgatgtctacggcgagtaccagcgcaggctgcgcgcc
gccaacgccctggacttcgacgacctgatcggggagacggtcgccgtgctgcaggccttc
ccgcagatcgcgcagtactaccgccgccggttccggcacatcctggtcgacgagtaccag
gacaccaaccacgcgcagtacgtgctggtgcgcgagctcgtgggaacggccggcgcggac
gacgaccctgccggcgtgccgcccgccgagctgtgcgtggtcggcgacgccgaccagtcg
atctatgcgttccgcggtgcgacgatccgcaacatcgaggacttcgagcgcgacttcccc
aacgccacgacgattctgctggagcagaactatcgctccacacagaccatcctgaacgcg
gcgaactcggtgatctcccgtaacaccggcaggcgcgagaagcggctgtggaccgacgcc
ggtgagggtgagctgatcgtcgggtacgtcgccgacaacgaacacgacgaggcacgcttc
gtcgcccaggagatcgactcgctgtcggattccatcccgggcttctcctacaacgacgtc
gcggtcttctaccgcaccaacaactcctcgcgggcgatcgaggaagtcttcatccgcgcc
ggcatcccgtacaaagtcgtcgggggagtgcgcttctacgagcgcaaggagattcgcgac
atcgtcgcctacctgcgggtgctcgacaaccccggggacgcggtcagcatgcggcgcatc
ctcaacaccccgcgccgcggcatcggggaccgcgccgaggcctgcgtggcggtgcacgcc
gagaacaccggcctgaacttcaacgacgcgctcgtcgcggccgccgagggcagggtgccg
atgctgaacacgcgctcggagaaggccatcgccggtttcgtcgcactgctcgacgaactg
cgcggcggtctcgacggcgaactcggcgacctcgtcgagacggtgctcgaccgcaccggc
taccgcgccgagctcgaggcctccagcgatccgcaggacctggcccggttggacaacctc
aacgaactggtcagcgtcgcacacgaattcagcaccgacctggccaacgctcgtgcgctg
gccgacggcgacgacgcgcagggcccggacaccgccgacgaggacgtccccgacaccggt
gtgctcgcggcgttcctggagcgggtgtcgctggttgccgacgccgacgacatccccgaa
cacggctcgggggtggtgacgatgatgaccctgcacaccgccaaggggctggagttcccg
gtggtgttcgtgaccggctgggaggacggcatgttcccgcacatgcgggccctcggcgat
cccaccgaactctccgaggaacggcggctggcctatgtcgggatcacccgcgcccggcag
cgtctctacctcagccgggcgaaggtgcgttcgtcgtggggccagccgatgctcaacccc
gagtcgcgcttcctgcgggagatcccccaggagctcatcgactggcgccgcaccgaggcg
ccggcgtcgtcgttctccgcgccggtcggcaacgccggccgctacggcacaccgcggccg
tcaccgacccgcccggcggcggggaagaggccgctgatcgtgctcgagccgggcgaccgc
gtgacccacgacaagtacggcctcggccgggtcgaagaggtctccggtgccggggaatcg
gcgatgtcgctgatcgacttcggcagcgcgggccgggtgaagctgatgcacaaccacgcg
ccgatctcgaagctctag
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