Mycolicibacterium parafortuitum: MPNTM1_02512
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Entry
MPNTM1_02512 CDS
T11082
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpat Mycolicibacterium parafortuitum
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpat03032
]
MPNTM1_02512
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_02512
Enzymes [BR:
mpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MPNTM1_02512
DNA replication proteins [BR:
mpat03032
]
Prokaryotic type
DNA Topoisomerases
MPNTM1_02512
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MPNTM1_02512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyphos_transf
Motif
Other DBs
NCBI-ProteinID:
XCI61371
LinkDB
All DBs
Position
2627406..2628428
Genome browser
AA seq
340 aa
AA seq
DB search
MRLTRSKLNSPGIVRKRRGKGFAYYGPEGELLADPDTAQRIKDLVIPPAWKNVWISPSPN
GHIQAVGTDVAGRRQYLYHERWQQERAEEKFDRVLALSLRLPEWRKQIAADLSRRGLERE
RVLALALQLLDRGYFRAGGEQSAEEFEHYGLATLLCEHVTLRNGAVVFDYPAKSGVQRNV
EIEDPEVVRAVRSLMRRGERTERLLVCRGGADGSWVDVRADDLNARFKELVGEEFTVKDL
RTWHGTVLAAAAFADAKAPTSKTRVKREVSAVMKEVSAELGNTPAVARTSYVDPRVVDGY
ANGLTIASAVRRATKIDEPDEAQAILEKATRMLIRRVARG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctgacccgaagcaaactgaattcgccgggcatcgtccggaagcggcgcggtaag
ggattcgcgtactacggtcccgaaggcgaactgctcgccgaccccgacaccgcgcagcgg
atcaaggatctcgtcatcccgccggcgtggaagaacgtctggatcagcccgtcacccaac
ggacacatccaggccgtcggcaccgatgtcgccggacggcgccagtacctgtaccacgag
cggtggcagcaggaacgcgccgaggagaagttcgaccgcgtgctcgcgctgtcgctgcgg
cttccggagtggcgcaagcagatcgcggcggatctgtcgcggcgcggactcgagcgtgag
cgggtgctggccttggcgctgcagctgctcgaccgcggttatttccgggctgggggcgag
cagtcggcggaggagttcgaacactacggtctggccaccttgctgtgcgagcacgtgacg
ctgcgcaacggggcggtggtgttcgactatcccgccaagagcggcgtgcagcgcaatgtg
gagatcgaggatccggaagtggtgcgcgcggtccgctcgttgatgcggcgcggtgagcgc
accgaacggctgctggtgtgccggggtggcgcggacggaagttgggtggacgtgcgcgcc
gacgacctcaacgcgcgattcaaggagctcgtcggtgaggagttcaccgtcaaggatctg
cgtacctggcacgggacggtgctggcggccgccgcgttcgccgacgcgaaggcgccgacg
tcgaagacacgggtgaagcgggaggtctccgcggtcatgaaggaggtgtcggccgagctg
gggaacaccccggcggtggcgcggacgtcgtacgtggacccgcgggtggtggacggttac
gccaacgggctgacgatcgcgtccgcggtgcgacgcgccaccaagatcgatgagcccgac
gaggcgcaggccatcctggagaaggccacccggatgctgatccggcgggtcgcacgcggc
tga
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