Mycolicibacterium parafortuitum: MPNTM1_02888
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Entry
MPNTM1_02888 CDS
T11082
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mpat Mycolicibacterium parafortuitum
Pathway
mpat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPNTM1_02888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpat03000
]
MPNTM1_02888
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_02888
Enzymes [BR:
mpat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MPNTM1_02888
Transcription factors [BR:
mpat03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MPNTM1_02888
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MPNTM1_02888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
DUF6233
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XCI61744
LinkDB
All DBs
Position
complement(2996967..2998454)
Genome browser
AA seq
495 aa
AA seq
DB search
MHTDFDRCYRAVQSKDARFDGWFVTAVLTTKIYCRPSCPVRPPFARNMRFYPTAAAAQRA
GFRACKRCRPDASPGSPEWNVRGDVVARAMRLIADGTVDRDGVSGLASRVGYTVRQLERL
MHAEVGAAPLALARAQRAQMARVLIETTEMPFSDVAFAAGFSSIRQFNDTVRTVCDLTPT
MLRSRARTRFGSDDTPGTGVMSLRLPVRTPFAFEGLFGHLAASAVPGVEEVRDGAFRRTL
RLPHGTGIVSLTPHPDHVGCRLIVDDFRDLSAAIARCRRLLDLDADPEAVVDTLSADPHL
APVVTKAPGQRIPRTVDEHELAVRVVLGQQVSLAAARTHVGRLAGAYGTPVDDPEGRLTH
VFPSVEALSEIDPQYLAFPKSRQRTLRALVAALSDGTLVLDPGCDWDAARETLLGIPGIG
PWTAEMIAMRGLGDPDAFPATDLGVAAAAKHVGLPSDPRPLTAHSSAWRPWRSYATQHLW
TVLDHSVNQWPPKEK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaccgatttcgaccgctgctaccgcgccgtccagtccaaggacgcccggttcgac
ggctggttcgtcaccgcggtgctcaccacgaagatctactgccgtccgagctgcccggta
cggccaccgtttgcgcgcaacatgcgcttctacccgaccgcggccgcggcccagcgggcc
ggcttccgcgcgtgcaaacgctgccgtcctgacgcgtcgccgggctcgccggaatggaat
gtgcgcggcgacgtcgtcgcgcgtgcgatgcgcctgatcgccgacggcaccgtggaccgc
gacggagtcagcgggctcgcgtcccgcgtcggttacacggtgcggcagctggaacggttg
atgcacgcagaagtcggtgccgcgcccctcgcactcgcacgcgctcaacgcgcccagatg
gcgcgggtcctgatcgagaccaccgagatgccgttcagcgatgtggctttcgcagcgggg
ttctccagcattcggcagttcaacgacaccgtgcgcacggtctgcgatctgaccccgacg
atgctccgcagccgggcgcgaacgcggttcggcagcgacgacacccccggcacaggggtg
atgtcgttacgtctgccggtgcgcacaccgttcgccttcgagggactgttcgggcatctg
gcggccagcgccgttcccggcgtcgaggaggtccgcgacggcgccttccgccggaccctg
aggttgccgcacggaaccggcatcgtcagcctgacgccccaccccgaccatgtgggttgc
cggctcatcgtcgacgacttccgcgacctgtcggcggccatcgcgcggtgcaggcggcta
cttgacctagacgccgatccggaagcggtggtcgacaccctcagcgccgatccccatctc
gcacctgtcgtgaccaaggcgccgggacaacggattccccgcaccgtcgacgagcacgaa
ctcgccgtgcgcgtagtcctcggacagcaggtttccctggccgcggcgcgtacccatgtg
gggcgcctggccggtgcgtacgggacacctgtcgacgatcccgaggggcggctcacccac
gtgttcccgtcggtggaggcactctccgagattgatccgcagtacttggcattcccgaag
tcgcggcaacgcacgctgcgggcgctcgtcgcggcactgtcggacggcactctcgtgctg
gatccgggatgtgactgggacgccgcacgcgagacccttctggggatccccggcatcggg
ccgtggacggccgaaatgatcgcgatgcgcgggctgggcgaccctgatgcgttcccggcc
accgatctcggcgtggccgccgccgcgaagcacgtcggtctaccgtcggatccgcgacca
ctgaccgcccatagcagcgcgtggcgaccgtggcgatcctatgcgacacaacatctttgg
acagtgctcgaccacagtgtgaatcagtggccaccgaaggagaagtga
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