Mycolicibacterium parafortuitum: MPNTM1_03450
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Entry
MPNTM1_03450 CDS
T11082
Name
(GenBank) Putative bifunctional exonuclease/endonuclease protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mpat Mycolicibacterium parafortuitum
Pathway
mpat03030
DNA replication
mpat03430
Mismatch repair
mpat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPNTM1_03450
03430 Mismatch repair
MPNTM1_03450
03440 Homologous recombination
MPNTM1_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpat03032
]
MPNTM1_03450
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_03450
Enzymes [BR:
mpat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPNTM1_03450
DNA replication proteins [BR:
mpat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPNTM1_03450
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPNTM1_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XCI62296
LinkDB
All DBs
Position
complement(3603678..3605534)
Genome browser
AA seq
618 aa
AA seq
DB search
MGQLTFADVDPLADPTLRETTFVVVDLETTGGRPAGERHDAITEIGAVKVRGGEVLGEFA
TLVDPGRAIPPQIVALTGITTAMVYDAPRIDSVLPAFLEFARGAVLVAHNARFDVGFLRA
AAERHHLPWPKPPVLCTVTLARRVLTRDEAPSVKLSALARLFGASTTPTHRALDDARATV
DVLHGLIERVGNQGVHTYSELRSYLPDVTPAQRSKKHLPRALPRTPGVYLFRGPSKEVLY
VGTAVDLRRRVSQYYNGADPRTRMKEMASLAVAVDHVECAHDLEAGVRELRLLAAHAPPY
NRRSKFPHKWWWVTLTEEPFPRFSAVRSPRTAGAVGPFRARADAYDAAALMARFTGVRTC
TNRLGRSAVHGPACPEREVSPCPAARGADAAGYAAATAAARALIDGHCDKPLTAALAQIA
DLAERHRYETAARLRDHTAATIDVLWRGQRLRALSAIPELVAARPDGNRGWHLAVIRHGQ
LASAGVAPRGVPPMPVVDAITSAAQSVLPTDGPLGGALVEETALIARWLGQPGVRIVRTE
TGYCSPIGAAGRWAAWAAAARSARLAAEQLRSSESLGSECLSEPHPTREQLFGRPGVDRV
LGPRETGLPGRDPLSVAG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagctcacgttcgcggatgtcgatccgctggccgacccgactctgcgtgaaacc
acctttgtggtggtcgatttggagaccacggggggccggcccgccggggagcggcacgac
gcgatcaccgagatcggcgcggtgaaggtacgcgggggcgaggtgctcggcgaattcgcc
accctcgtcgaccccggtcgcgcgatcccgccccagatcgtcgcgctgaccgggatcacg
acggcgatggtctacgacgcgccgagaatcgacagcgtcctgcctgccttcctcgaattc
gcccgcggcgcagtgctcgtcgcgcacaacgcccggttcgacgtcggcttcctgcgcgcc
gccgccgaacgccatcacctgccgtggcccaagccgccggtgctgtgcaccgtcacgctg
gcgcgccgcgtgctcacccgcgacgaggcgccgagcgtgaagttgtcggcgctggcgcgg
ctgttcggtgcgtccaccaccccgacgcaccgcgcgctcgacgacgcccgcgccaccgtc
gacgtcctgcacgggctgatcgaacgcgtcggcaaccagggcgtgcacacctactccgag
ctgcgctcctatcttcccgacgtcaccccggcgcagcgcagcaaaaagcacctcccacgc
gccctgccgcgcacgcccggcgtctacctgttccgcggcccgtccaaggaggtgctctac
gtcggcaccgcggtggatctgcggcgccgggtctcccagtactacaacggcgccgaccca
cgcacccggatgaaggagatggcctcactggccgtcgcggtcgaccacgtcgagtgcgcg
cacgacctcgaagccggggtgcgcgagctgcgactgctggccgcccacgcgccgccgtac
aaccggcggtcgaagttcccgcacaagtggtggtgggtgacgctgaccgaggagccgttc
ccgcgcttctcggcggtgcgctcaccgcgcaccgccggcgcggtggggccgttccgtgcg
cgcgccgacgcatacgacgccgcggcgctgatggcccgcttcaccggggtgcgcacgtgc
accaaccggctgggccgcagcgccgtccacgggccggcgtgcccggagcgggaggtgtcg
ccgtgtccggccgcgcggggcgccgacgccgccgggtacgccgccgccaccgccgccgcg
cgggccttgatcgacgggcattgcgacaagccgctcaccgccgcgctggcgcagatcgcc
gatctggccgaacgtcaccgctacgagacggccgcccggctgcgcgaccacaccgccgcg
acgatcgacgtgttgtggcggggccagcggctgcgggcgttgtcggcgatccccgagctg
gtcgccgcccgcccggacggcaaccggggctggcacctcgcggtgatccggcacggccag
ctcgcctcggcgggtgtcgcgccgcgcggagttccgccgatgccggtggtcgacgcgatc
acctccgccgcgcagtccgtgctgcccaccgacgggccgctcgggggcgcgctggtcgag
gagaccgcgctgatcgcccgctggctgggccaaccgggggtccggatcgtgcgcaccgaa
accggctactgctcgccgatcggcgcggcaggccggtgggcggcgtgggccgcggccgcc
cgctcggcgcggctggctgccgagcagctgcgcagctcagagtcgctgggctcagagtgc
ctgagtgaaccgcacccaacgcgcgagcagctgttcggccgccccggagtcgatcgcgtc
cttggcccgcgcgagaccggactcccaggccgggacccattgagcgtcgctggatag
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