Mycolicibacterium parafortuitum: MPNTM1_03582
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Entry
MPNTM1_03582 CDS
T11082
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mpat Mycolicibacterium parafortuitum
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpat03019
]
MPNTM1_03582
Enzymes [BR:
mpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MPNTM1_03582
Messenger RNA biogenesis [BR:
mpat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MPNTM1_03582
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
HVO_A0261_N
AAA_22
nSTAND3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XCI62426
LinkDB
All DBs
Position
3744572..3747343
Genome browser
AA seq
923 aa
AA seq
DB search
MTTRPEAPEGSPADSLAAFTALLPFSLDGFQVRACEALAQGHGVLVCAPTGAGKTIVGEF
AVHLALAAGRKCFYTTPIKALSNQKHNDLVARYGPERIGLLTGDQSINGDADVVVMTTEV
LRNMLYADSPALHGLSYVVMDEVHFLADRMRGAVWEEVILHLSEDVRLVSLSATVSNAEE
FGGWIKAVRGDTTVVVDEHRPVPLWQHVLVGKRLLDLFDYRASGPAGRDLLVDPELLRHI
AHRREADRLLDWQPRGRGRQGRPQGVYRTPGRPEVITVLEQARLLPAITFIFSRAGCDAA
VKQCLRSSLRLTTHEERARIAEIVDRRTADLNDTDLIVLDFHEWREGLLRGLAAHHAGML
PTFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKYNGEQHMPLTPGEYTQL
TGRAGRRGIDVEGHAVVLWNPDVDPAEVAGLASTRTFPLRSSFTPTYNMTINLVHQMGPE
QAHRLLERSFAQYQADRSVLGLVRGVERGERMLAELAAEMGGRDAPILDYVRLRAKITER
ERAQSRASRLQRRQATNDALAALRRGDIISISHGKHGGLAVVLEPARDDDDPRPLVLSEH
RWAGRISSADYAGAPGPLGRMSLPKHVEHRNPRARRDLASALRSAAGNLDVPSARRRSGP
APEGDIDPELVALRNRVKAHSAHSLPDREERARLAERYLRVERDNAQLRQKISAATNSLA
QTFDRIVVLLTERGFITTTGDSPAVTDDGRLLARIYSESDLLVAECLRTGIWEGLDAAEL
AAALSAVLYESRRDGPGVQDGSDIPTGRLRRALNRTRALSGELRADEHRHRLPHSREPDT
GFVAAIHRWAATGDLASALAAGDTSGSGGTGASMSAGDFVRWCRQVLDLADQVRNAAPTP
ALRATAKRAINDVRRGVVAVDAG
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcgacctgaggcgcccgaaggttcgcccgcggacagtcttgcggcgttcacc
gcgctgttgccgttctcgctggacggcttccaggtgcgcgcctgtgaggcgctggcgcaa
gggcacggcgtgctggtctgcgcgcccaccggtgcgggcaagacgatcgtcggcgagttc
gcggtgcacctggccctggccgccgggcgcaaatgcttctacaccaccccgatcaaggcg
ctgagcaaccagaagcacaacgacctggtggcccggtacgggcccgaacgcatcggcctg
ctgaccggcgaccagtccatcaacggcgacgccgatgtcgtggtgatgaccaccgaggtg
ctccgcaacatgctctacgcggactcgcctgccctgcacggcctttcctacgtcgtgatg
gacgaggtgcacttcctcgccgaccggatgcgcggcgcggtgtgggaggaggtgatcctg
cacctgtccgaggacgtgcggctggtgagcctgtcggcgacggtcagcaacgccgaggag
ttcggcggctggatcaaggcggtgcgcggcgacaccacggtggtggtcgacgagcaccgg
ccggtgccgttgtggcagcacgtcctggtcggcaagcggctgctcgacctgttcgactac
cgcgcatccggtccggccggacgcgacctgctcgtcgacccggaactgctgcgccacatc
gcgcaccgccgcgaggccgaccgactcctggactggcagccccgtggccgcggcaggcag
ggccgtcctcagggggtgtaccgaacgccggggcggcccgaggtgatcaccgtgctcgag
caggcccgcctgctgcccgcgatcaccttcatcttctcccgcgcaggatgcgacgccgcg
gtcaagcagtgcctgcggtcgtcgttgcggttgaccacgcacgaggagcgggcccgcatc
gccgagatcgtcgaccgccgcaccgccgacctcaacgacaccgacctgatcgtgctcgac
ttccacgagtggcgcgaagggctgctgcgcggcctggccgcccaccacgcgggcatgctt
ccgacgttccgccacaccgtcgaagagttgttcaccgccggtctggtgaaagccgtgttc
gccaccgagaccctggcgctgggcatcaacatgccggcccgcaccgtggtgctggagcgg
ttggtgaagtacaacggcgagcagcacatgccgttgacgccgggggagtacacccagctg
accggcagggccgggcggcgcggcatcgacgtcgagggtcacgccgtggtgctgtggaac
cctgacgtcgaccccgccgaggtcgccgggctggcgtcgacccggacgttcccgctgcgc
agctcgttcaccccgacctacaacatgacgatcaacctggtccaccagatgggtcccgag
caggcgcatcggctgctggaacggtcgttcgcgcagtaccaggccgaccgttcggtgctc
gggctggtgcgcggggtcgaacgcggggaacggatgctcgccgaactcgccgccgagatg
ggcggccgcgatgcgccgatcctggactacgtgcggctgcgcgcaaagatcaccgaacgc
gaacgcgcacagtcgcgggcgtcccggttgcagcgcaggcaggccaccaacgacgcgctg
gccgcgttgcgccgcggcgacatcatctcgatcagtcacggcaagcacggcgggctggcc
gtggtgctcgaacccgcgcgcgacgacgacgatccgcggccgctggtgctctccgaacat
cggtgggccggccggatctcgtcggccgactacgccggcgcgcccggtccgctgggcagg
atgtcgttgcccaagcacgtggagcaccgcaatccgcgggcccggcgcgatctggcctcg
gcgctgcggtcagcggcgggcaacctcgacgtcccgtcggcccggcgccgcagcggtccg
gcgcccgagggcgacatcgaccccgagctcgtcgcgctgcggaaccgggtcaaggcgcac
tcggcgcattcgctgcccgaccgggaggagcgggcccggctggcggaacgctatctgcgg
gtcgaacgggacaacgcgcaactgcggcagaagatctcggcggcgacgaactcgctggcg
cagaccttcgaccggatcgtggtgctgctgaccgagcgcggattcatcaccacgaccggt
gacagccccgcggtcaccgacgacggccggctgctggcccgcatctacagcgagagcgac
ctgttggtcgccgaatgcctgcgcaccgggatctgggagggcttggacgccgcggaactg
gcggccgcgctgtccgcggtgctctacgagtcccgccgcgacgggccgggtgtgcaggac
ggctcggacatcccgaccggacggctgcgccgcgccctaaaccgcacccgtgcgctgtcg
ggcgaactgcgtgccgacgagcaccgacaccggctcccgcacagccgcgaacccgacacc
ggtttcgtcgccgcgatccaccggtgggccgcgaccggggacctggcctcggcgctggcc
gccggggatacctcgggttctggggggaccggcgcgtcgatgtcggcgggcgatttcgtg
cgctggtgcaggcaggtgctcgatctcgctgatcaggtgcgcaacgccgcgccgacaccg
gctttgcgggcgaccgcgaaacgcgctatcaacgacgttcggcgcggcgtcgtagctgtt
gatgccgggtag
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