Mycolicibacterium parafortuitum: MPNTM1_04533
Help
Entry
MPNTM1_04533 CDS
T11082
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mpat Mycolicibacterium parafortuitum
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpat03021
]
MPNTM1_04533 (sigF)
Transcription machinery [BR:
mpat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPNTM1_04533 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
Sigma70_ECF
DUF134
MarR
DUF7343
HTH_31
HTH_3
HTH_ParB
DUF1492
Motif
Other DBs
NCBI-ProteinID:
XCI63362
LinkDB
All DBs
Position
4828194..4829006
Genome browser
AA seq
270 aa
AA seq
DB search
MSEARREYADVPNMIRQLRQLDSTSAAYRRLHGDIIALTLPLADHTARRFRGRGQSHDDL
FQVASVGLVNAVKRFDPDSGSDFLAFAVPTIMGEVRRYFRDCGWAVKVPRRLKDLNSQLV
RARAELTQTHGRAPTATEVAAHLGIDREEVVQATIASSNYSTLSTDSTTGPDGDFVALRE
TLGEPDARLDTVLDMETIRPLIEKLPPREQAVLKLRFFDEMTQTQIAERMGYSQMHVSRL
LAKALGTLRSQAVSDGTADELTTVRRTQVA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaggcccgccgcgagtacgccgatgtgccgaacatgatccgtcaattgcgtcag
ttggacagcacgtcggccgcgtaccgcagacttcacggagacatcatcgcgctgaccctt
ccactggccgaccacaccgcccggcgcttccgcggccgcggacagtcgcacgacgacctg
ttccaggtcgccagcgtcgggctggtcaacgccgtgaagcgcttcgatccggacagcggt
tcggacttcctggcgttcgcggtcccgaccatcatgggggaggtccgccgctacttccgt
gactgcggctgggcggtcaaggttccgcgtcggctcaaggacctcaacagccaattggtc
cgtgcccgtgcggagttgacacaaacgcacggtcgtgcgccgactgccaccgaagtcgcg
gcccaccttgggatcgaccgcgaagaggtcgtccaggcaaccatcgccagcagcaactac
tcgacgctgtccaccgacagcaccaccggtcccgatggggatttcgtggcgctgcgcgaa
accctcggcgaacccgacgcccggctcgacaccgtgctcgacatggagaccatccggccg
ctgatcgagaagttgccgccgcgcgagcaggcggtgttgaagctgcgcttcttcgacgag
atgacccagacccagatcgccgaacgcatgggctattcacagatgcacgtgagccggttg
ctggccaaggcgctgggtacgttgcgcagccaggcggtcagcgacggcacggccgacgag
ctgacgactgtgcgccgaacccaggtcgcctag
DBGET
integrated database retrieval system
