KEGG   Mycolicibacterium parafortuitum: MPNTM1_04873
Entry
MPNTM1_04873      CDS       T11082                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
mpat  Mycolicibacterium parafortuitum
Pathway
mpat03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mpat00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MPNTM1_04873 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpat03019]
    MPNTM1_04873 (rnc)
   03009 Ribosome biogenesis [BR:mpat03009]
    MPNTM1_04873 (rnc)
   03036 Chromosome and associated proteins [BR:mpat03036]
    MPNTM1_04873 (rnc)
Enzymes [BR:mpat01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     MPNTM1_04873 (rnc)
Messenger RNA biogenesis [BR:mpat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MPNTM1_04873 (rnc)
Ribosome biogenesis [BR:mpat03009]
 Eukaryotic type
  90S particles
   RNase
    MPNTM1_04873 (rnc)
 Prokaryotic type
  rRNA processing factors
   MPNTM1_04873 (rnc)
Chromosome and associated proteins [BR:mpat03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     MPNTM1_04873 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: XCI63696
LinkDB
Position
complement(5147842..5148546)
AA seq 234 aa
MTTDRAPLLKALGIDLSEDLLTIALTHRSYSYENGGVPTNERLEFLGDSVLGLTITEELY
HRHPDRSEGDLAKLRASIVNTQALADVGRNLSPDGLGAYLLLGKGEENSGGADKSSILAD
GVESLLGAIYLEHGGAAAREVILRLFSGLLDTAPTLGAGLDWKSSLQELTASLGLGAPSY
QVTSTGPDHDKEFTAVVVVGEKVYGTGVGRTKKEAELKAASAAWNALKSAHPDA
NT seq 705 nt   +upstreamnt  +downstreamnt
gtgacgacggaccgggcgcccctgctcaaagcgctggggatcgacctgtccgaggacctg
ctcaccatcgcgctgacccatcgcagttactcctacgagaacggcggagtgccgaccaac
gagcggctggagttcctcggcgattcggtactcggtctgacgatcaccgaagagctctat
catcgccatcccgaccgctccgagggcgatctggccaagctgcgtgcgagcatcgtcaac
acccaggcgctggccgacgtcggccggaacctgtccccggacgggctcggcgcctatctg
ttattgggcaaaggcgaggagaactccggcggcgcggacaagtccagcatcctcgccgac
ggtgtcgaatccctgctcggcgcaatctatctcgaacacggcggggccgcggcgcgcgaa
gtcatcctgcgtctgttcagtggtctgctggacaccgcaccgacactcggggccgggctg
gactggaagagcagcctgcaggaactgaccgcgtccctcggcctgggcgcgccgtcctat
caggtcacctcgaccggacccgatcacgacaaggagttcaccgccgtcgtggtggtcggg
gagaaggtctacggcacgggcgtcggccgcaccaagaaggaagccgagctcaaggccgcc
tcggccgcgtggaacgcgctgaagtccgcgcatccggatgcctga

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