Mycolicibacterium parafortuitum: MPNTM1_04919
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Entry
MPNTM1_04919 CDS
T11082
Symbol
ihfA
Name
(GenBank) Integration host factor subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
mpat Mycolicibacterium parafortuitum
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpat03032
]
MPNTM1_04919 (ihfA)
03036 Chromosome and associated proteins [BR:
mpat03036
]
MPNTM1_04919 (ihfA)
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_04919 (ihfA)
DNA replication proteins [BR:
mpat03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MPNTM1_04919 (ihfA)
Chromosome and associated proteins [BR:
mpat03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MPNTM1_04919 (ihfA)
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MPNTM1_04919 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Mitofilin
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
XCI63742
LinkDB
All DBs
Position
complement(5198399..5199058)
Genome browser
AA seq
219 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRQATAAVENVVDTIVRAVHKGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQKLPAEGPAVKRGVTAASTARKAAKKAP
AKKAAAKKAAPAKKATAAKKAAPAKKAAPAKKAATKTAAKKAAPAKKAAPAKKATAAKKA
APAKKAPAKKAAPAKAAAKKAAPAKKAPAKKAPAKRGRK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcatcgacgtactcacggagaaattgggctcggatcgtcggcaa
gcgactgcggcggtggagaatgtcgttgacaccatcgttcgcgcggtgcacaagggtgag
agcgtcacgatcaccggcttcggtgttttcgagcagcgccgccgtgccgcccgcgtggcg
cgcaatccccgcactggcgagacggtgaaggtcaagcccacctccgtcccggcgttccgt
cccggcgctcagttcaaggccgttgtgtctggcgcgcagaagcttccggccgaggggccg
gcggtcaagcgtggcgtgacggctgcgagcacggctcgtaaggctgccaagaaggccccg
gccaagaaggccgcggcgaagaaggcggctcccgccaagaaggccaccgccgccaagaag
gcagcgccggccaagaaggcggcgccggccaagaaggccgcgaccaagaccgccgccaag
aaggcggcaccggccaagaaggcagcgccggccaagaaggccaccgccgccaagaaggca
gcgcccgccaagaaggctccggccaagaaggcagcgcccgccaaggccgccgccaagaag
gcagcgcccgccaagaaggcacccgcgaagaaggctccggccaagcgcggacgcaagtag
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integrated database retrieval system
