Mycolicibacterium parafortuitum: MPNTM1_05411
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Entry
MPNTM1_05411 CDS
T11082
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpat Mycolicibacterium parafortuitum
Pathway
mpat03420
Nucleotide excision repair
mpat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPNTM1_05411
03430 Mismatch repair
MPNTM1_05411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpat03400
]
MPNTM1_05411
Enzymes [BR:
mpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPNTM1_05411
DNA repair and recombination proteins [BR:
mpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPNTM1_05411
MMR (mismatch excision repair)
Other MMR factors
MPNTM1_05411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Helicase_Sgs1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XCI64228
LinkDB
All DBs
Position
complement(5727491..5729611)
Genome browser
AA seq
706 aa
AA seq
DB search
MMVAMSPTASRDLLLGDLDEEQREAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVTAGHV
APSQVLAVTFTQRAAGEMRGRLRALDDGTGTGAVQAQTFHAAARRQLSYFWPRVVGNTDW
QLMDSKFAVVAQAANRAGLPTGTDNVRDLAGEIEWAKASLISPEGYAAAVADVGRDIPFD
AAKVAAVYDHYETLKTRREGVALLDFDDLLLHTAAAIENDPAVAQEFRDRYRCFVVDEYQ
DVTPLQQRVLDAWLGGRDDLTVVGDANQTIYSFTGASPRYLLDFSRRFPEAAVVRLERDY
RSTPQVVSLANRVIAAARGRMAGSKLHLVGQRPPGPNPVFKEYPDEVAEATAVAKSIKTL
IDSGTAASEIAVLYRINAQSEVYEEALTEAGVAFQVRGGEGFFSRQEIRQALLAMQRTSE
RQPDLDGPLPELVRAILEPLGLTGEPPAGTRARDRWEALVALAQLVDDEVAQRPGLDLRA
LLTELRQRADSRHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALSHGPDSEP
VEEERRLLYVGVTRARVHLTLSWALARNPGGRQGRRPSRFLNGIAPQSQRDDSPSKARRA
RGPAPRCRICNAQLTTPPAIMLRRCETCPSDIDDELLTELKEWRLRISKEMSVPAYVVFS
DNTLIAIAESLPTDDAALVAIPGIGARKLEQFGADVLALVKGRQKS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcgccatgtctcccacggcgtcgcgcgatctgctgctgggcgatctcgacgaa
gagcagcgtgaggcggtgctggcgccgcgcggcccggtctgtgtgcttgccggtgccggc
accggcaagacccgcaccatcacccgccgcatcgcccatctggtgacggccggccacgtc
gccccgagccaggtgctggcggtgacgttcacccagcgcgccgccggggagatgcgcggc
cggctgcgcgcgctcgacgacggcaccggcaccggtgcggtgcaggcgcagacgttccac
gcggcggctcgccggcagctgtcgtatttctggccccgggtggtcggcaacaccgactgg
cagttgatggacagcaagttcgccgtggtcgcgcaggccgccaaccgcgccggcctgccg
accggcaccgacaacgtgcgcgatctggccggcgagatcgagtgggcgaaggcgtcgctg
atcagcccggagggctacgccgccgcggtcgccgacgtcggacgcgacatcccgttcgac
gctgccaaggtcgccgcggtctacgaccactacgagacgctcaagacccggcgtgaaggg
gtcgcgctgctggatttcgacgacctgctgctgcacaccgccgcggcgatcgagaacgac
cctgcggtcgcgcaggagttccgcgaccggtatcgctgtttcgtcgtcgacgaatatcaa
gacgtcaccccgctgcagcagcgcgtgctcgacgcgtggctcggcggccgcgacgacctg
accgtcgtcggtgacgcgaaccagaccatctactcgttcaccggcgcctcaccgcgctac
ctgctggacttctcgcggcgcttccccgaagcggccgtggtccggctcgaacgcgactac
cggtccaccccgcaggtggtctcgctggccaaccgggtcatcgccgccgcccgcggccgg
atggcgggtagcaagctgcacctcgtcgggcagcgcccgccgggccccaacccggtgttc
aaggagtacccggacgaagtcgccgaggccaccgcggtcgccaagagcatcaagacgctc
atcgactccggtaccgccgcgtccgagatcgcggtgctctaccgcatcaacgcccagtcc
gaggtttacgaggaggcgctcaccgaagccggggtggcgttccaggtgcgcggcggggag
gggttcttcagccgccaggagatccgccaggctctgctggcgatgcagcgcacctccgag
cgccaacccgatctcgacggtccgctgcccgagctcgtgcgcgccatcctcgaaccgctc
gggttgacgggcgaaccgcctgcgggcacccgcgcgcgggaccgctgggaggcgttggtc
gcgctggcccagctcgtcgacgacgaggtcgcgcagcggcccggactggacttgcgcgcc
ctgctgaccgaactgcgccagcgcgccgattcgcgccacccaccggtggtgcagggcgtg
acgctggcgtcgctgcacgcggcgaaaggcctggagtgggatgcggtgttcctcgtcggt
ctggccgacggcacgctgccgatctcccacgcgctgtcgcacggccccgacagcgagccg
gtcgaggaggagcgcaggctgctgtacgtcggggtgacccgggcgcgggtacatctgacg
ctgagctgggcgctggcgcgcaacccgggcggtcggcagggccggcgcccgtcgcgcttc
ctcaacggcatcgcgccgcagtcccagcgcgacgacagccccagcaaggcgcgccgggct
cgcggaccggcaccgcggtgccgaatctgtaacgcgcagttgacaactccgccggccatc
atgctgcgccgctgtgagacgtgtccgtcggacatcgacgacgaactgctcaccgaactg
aaggaatggcggctgcggatctccaaggagatgagcgtgcccgcgtatgtggtgttcagc
gacaacaccctcatcgcgatcgccgagtcgctgcccaccgacgacgcggcgctggtcgcg
atccccggcatcggcgcacgcaagctcgaacagttcggcgccgacgtcctcgcgttggtc
aaaggccgccaaaagtcgtaa
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