KEGG   Mycolicibacterium parafortuitum: MPNTM1_05524
Entry
MPNTM1_05524      CDS       T11082                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mpat  Mycolicibacterium parafortuitum
Brite
KEGG Orthology (KO) [BR:mpat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpat03021]
    MPNTM1_05524
Transcription machinery [BR:mpat03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MPNTM1_05524
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_24 HTH_Crp_2 MarR MarR_2 Sigma70_ECF HTH_3 DUF7343 HTH_IclR HTH_ParB KORA Peptidase_inhib_put DUF134 HTH_31
Other DBs
NCBI-ProteinID: XCI64339
LinkDB
Position
complement(5839535..5840260)
AA seq 241 aa
MFRELAQLEEGSAQFQRQRDRIVERCLPLADHIARRFDGRGEPRDDLVQVARVGLVNAVI
RFDVNAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGAATAELSQRLGRA
PTATELAAELEMDRDEVIEGLVAGSSYNTLSIDSGGGGGNEEAPAIADTLGDVDLTLDQI
ENREALRPLLAALPERERAVLVLRFFESMTQTQIAERVGISQMHVSRLLAKSLARLRDQL
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttccgagagttggcccaactcgaggagggttcggcacagtttcagcgtcagcgtgac
cgcatcgtcgagcgctgcctgccgcttgccgatcacatcgcccgccgcttcgacggccgc
ggtgaaccgcgcgacgacctggtccaggtggcccgcgtcggtctggtcaacgccgtcatc
cggttcgacgtcaacgccggctcggacttcgtgtccttcgcggtgccgacgatcatgggt
gaggtccgcaggcacttccgcgacaacagctggtcggtcaaggtgccgcggcgcctcaag
gaactgcatctacggctcggcgccgcgacggccgaactgagccaacgcctgggccgcgcc
ccgaccgcgaccgagctggccgcggaactggagatggaccgcgacgaggtcatcgaaggc
ctggtcgccggcagctcgtacaacacgctgtccatcgacagcggcggcggcggcggcaac
gaggaagcccccgcgatcgccgacaccctcggcgacgtcgacctgacgctcgatcagatc
gagaaccgcgaggcgctgcgtccgctgctggcggcgctgccggaacgcgagcgggcggtg
ctggtgctgcgcttcttcgagtcgatgacgcagacccagatcgccgaacgcgtcggcatc
tcgcagatgcacgtgtcgcggctgctcgcgaagtcgctagcgcggctccgtgaccagctg
gaatga

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