Methyloradius palustris: ZMTM_00740
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Entry
ZMTM_00740 CDS
T07445
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mpau
Methyloradius palustris
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpau03016
]
ZMTM_00740 (truB)
Enzymes [BR:
mpau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ZMTM_00740 (truB)
Transfer RNA biogenesis [BR:
mpau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ZMTM_00740 (truB)
Prokaryotic type
ZMTM_00740 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TPR_Slam
PUL
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BCM23815
UniProt:
A0A8D5JKD4
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All DBs
Position
88438..89340
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AA seq
300 aa
AA seq
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MQFKRIKRDISGVLLLDKPLGISSNQALQQVKRLYQAAKAGHTGSLDPLATGLLPICFGE
ATKFSHFLLDADKSYRALVALGSTTTTADAEGEVLATKEVNVNQALVEAVLKAFTGPINQ
VPPMYSALKHEGKNLYEYARAGIEIEREARNVTIYSLVLNSLNEHTIDMTVVCSKGTYIR
TLAEDIGQMLGCGAHLNGLRRLTSAHFLLNQALTIEQLEAMTAEQRDACLLAPDVAIDNL
PRVDIDEDSAFYLMRGQEVWKSGLNIQSQFRIYNHLGIFLGLGEQTADGKIAPKRLVSSK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatttaaaagaatcaaacgtgatatcagtggcgtgctgctactggataagccgcta
ggcatatccagtaatcaggcattgcagcaggttaaacgactctatcaagccgctaaagct
ggccatacaggcagcttagacccattggcgactgggcttttgccaatctgctttggcgag
gctacaaaattttcccattttttgctggatgccgataaaagttatcgtgcattggtagct
cttggtagcacgacgacgactgctgatgcagagggcgaggtattagctactaaggaggtg
aatgtaaaccaagctctggtagaagctgttctgaaggcctttactggtccaataaaccaa
gtaccgcccatgtattctgcattgaagcatgagggcaagaatctgtatgaatatgccaga
gctggcatagagatcgaacgtgaagcgcgtaacgtgaccatttatagcttggtgcttaat
agtcttaacgagcacaccatagatatgacggttgtatgtagcaagggtacttatattcgc
accctggctgaagacatcggtcaaatgcttggctgcggcgctcacctgaacggcttgcgc
agactgacaagtgcgcattttttgctaaatcaagcgctgacaatagaacagttggaggcg
atgaccgctgagcaaagagatgcctgtttgctagcacccgacgtagctatcgacaatctg
ccgcgtgtggatattgatgaagacagcgctttttatttaatgcgcggtcaagaagtatgg
aaatcgggtctgaacatacaaagtcagtttcgtatttataaccatctggggatttttctg
ggcttgggcgagcaaactgctgatggcaaaattgcacccaagcgattagtttcaagtaaa
taa
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