Methyloradius palustris: ZMTM_01060
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Entry
ZMTM_01060 CDS
T07445
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mpau
Methyloradius palustris
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpau03400
]
ZMTM_01060
Enzymes [BR:
mpau01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ZMTM_01060
DNA repair and recombination proteins [BR:
mpau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ZMTM_01060
Prokaryotic type
ZMTM_01060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCM23847
UniProt:
A0A8D5JXK5
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All DBs
Position
118145..119710
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AA seq
521 aa
AA seq
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MTAPVQIVWFKRDLRVTDHAPLAQACLAGPVLPIFAWEPTVWVGDDYVAQHQAFARECLQ
ELRQQLATLGLTLIEWPLGIIDALQDIRQRQQIAGLWSHEETGNGATFDIDRLVASWCKA
HQVNWHEIPQHGVVRRLKNRNVWNANWERQMQQAVAMLPTNINAGPVIQISQIGQPIAAG
TDKPNRQHGGTVAASKLFEGFLQGRAANYRRGMSSPLTATKNCSRLSPYLAWGVLSMREV
VQATRARRVELKEMNDPETKGLAAGLVGFESRLHWHCHFIQKLESEPEMEFQHLHPAYAG
LRDEAMADVESQRRLQAWVSGETGWPLVDACMAMLRKTGWLNFRMRAMLMSTASYLLWLH
WREPGLHLAREFLDYEPGIHWTQTQMQSGTTGINTLRMYNPIKQAMDQDPTGRFVRQWLP
QLANVPDTWIFQPWLMPPALQLKTGCVIDRDYPSPVVDIETAMREARARLSVVRRSPEAQ
SQIKQIVKKHASRKGMPGSTRDAKGKEQTKKKTKTPQLSLF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacctgttcaaattgtatggttcaaacgtgatctgcgtgtgacagatcatgcg
ccactggcacaagcttgcttagctgggccagtgctgccgatattcgcctgggagccaact
gtgtgggttggcgatgattatgtggcacagcatcaggcgtttgcgcgtgagtgtttacaa
gagctacgtcaacaattagcaaccttgggtttaaccctgattgaatggccactgggcatt
atcgatgccttgcaggacatccgccaacgtcagcaaattgctgggctttggagccatgaa
gaaacaggcaatggtgctacgtttgacatagatcgcttagtggctagctggtgtaaagct
caccaagtgaattggcatgaaatcccccagcatggcgtggtgcgtaggctaaaaaatcgg
aatgtgtggaatgccaattgggagcgccagatgcagcaagctgtagctatgctgccaacg
aatatcaatgctggccccgtcatacaaatctcgcaaataggacagccaatagcggcagga
acagataaaccaaacaggcaacacggcggcacagttgctgcgtcaaagttatttgaaggc
tttttacaaggccgcgctgcgaattatcggcgtggtatgtccagcccgcttactgccacc
aaaaactgctcacgcttatcaccttatctcgcttggggcgtgcttagtatgcgggaggtg
gtgcaagcaacaagggctaggcgagttgaactaaaagaaatgaacgatcccgaaaccaaa
ggtctggcagcagggctggtaggctttgaaagtcgcctgcactggcattgccactttatt
caaaagctggaaagtgagcctgaaatggagtttcagcatctgcaccctgcctatgcaggc
ctgcgtgatgaagcgatggcggatgttgaatcacaacgcaggctgcaggcgtgggtgagc
ggcgaaacaggttggccattggtcgatgcctgcatggctatgctacgaaaaacaggctgg
cttaatttccgtatgcgcgccatgctgatgagcactgcatcgtatttgctatggttgcac
tggcgtgagccaggcttgcatctggcgcgggagtttttggattacgaaccaggcattcat
tggacgcaaacccagatgcagtctggcaccacgggcatcaatactttacgtatgtataac
ccgattaaacaggcgatggatcaagaccccactggccgttttgtgcggcagtggttacca
caattagccaacgtacctgatacctggatatttcagccttggcttatgccacctgcgctg
caactcaaaactggctgtgtgattgatcgcgattatccatcgccagtcgttgatattgaa
actgccatgcgcgaggcgcgtgcaagattatccgtagtgcgccgctcacctgaagcacaa
agccagattaaacaaatcgtcaaaaaacatgcgtcgcgcaaaggcatgcccggcagtacc
cgtgatgcaaaaggtaaagagcaaaccaagaaaaaaacgaaaactccacaactgtcactt
ttttga
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