Methyloradius palustris: ZMTM_02170
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Entry
ZMTM_02170 CDS
T07445
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpau
Methyloradius palustris
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpau03032
]
ZMTM_02170
03400 DNA repair and recombination proteins [BR:
mpau03400
]
ZMTM_02170
Enzymes [BR:
mpau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ZMTM_02170
DNA replication proteins [BR:
mpau03032
]
Prokaryotic type
DNA Topoisomerases
ZMTM_02170
DNA repair and recombination proteins [BR:
mpau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ZMTM_02170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
BCM23958
UniProt:
A0A8D5GAG2
LinkDB
All DBs
Position
complement(227282..229870)
Genome browser
AA seq
862 aa
AA seq
DB search
MSKLLIVESPSKAKTLKKYLGKDFEVLASYGHVRDLIPKTGAVDTDNDYAMKYELIERNA
KHVDAIAKAAKVADAIYLATDPDREGEAISWHIAEILKTKKLLKDKILKRVVFHEITKSA
VEHAIANPRDIAMPLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIVE
RELEIEAFKSQEYWTIHLESRKHQHAFDAKLVQLDGKKVEQFTITNQGQEEAVVGKLLLA
SAGKTTVTRVEKKQKNRSPAAPFTTSTLQQEAVRKLGFTTSRAMRIAQQLYEGIDVGGGA
VGLITYMRTDSFSIATEAVMQIRDYIKKNFDGEYLPKAPIMYKTKAKNAQEAHEAIRPTD
ITRSPASLSHVLTPEQFKLYEMIWKRALACQMAPARFDAVSVDLAIGSEANLFRATGQTM
IFPGFIAVYMESVDDAEEEGESKLPVLETGEILDVNKIFGDQHFTEPPPRYSEASLVKVL
EEYGIGRPSTYASIISTLQDREYVLLDKKRFTPTDVGRVVNKFLTEHFTKYVDYDFTANL
ENELDDIAEGAREWLPVLDAFWQGFNTQIVAKKDVERPGTELIDEACPKCGKPLSKQLSR
YGSFIGCTGYNDTPKCDYKRSMNGDGAAMGSEPVKIGVDTESGKDILLLVGPYGPYLQLG
LPEEDAKKKPKRVSIPKDIALADVNLEVASKLIALPRDLGQHPETNKKIVANIGRFGPYV
NHDGKFKSIPRTDSVFDIDQARAVELLAQANTGPAPIRELGKHPTEDGDIAIYSGKFGPY
VQHLKLRATLPKSVEPESITLEEALELLSAKAAKEAENPSKKTRSRAGAKKVASKSAPAK
KVAAKKPTAAKKAASKKIAAVA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaattattgattgttgaatcgccttccaaagccaaaaccctgaaaaaatacctg
ggtaaggactttgaagtgctcgcctcttatggccatgtgcgcgacctcatcccgaaaact
ggcgccgtcgatacggacaatgactacgccatgaaatatgagctaatagagcgtaatgcc
aaacatgtggatgcgattgccaaagccgctaaagtcgccgatgcgatatatctggcgact
gacccggaccgtgaaggcgaagcgatttcatggcacattgcagagatactaaaaaccaaa
aaactacttaaggacaaaatactcaagcgcgtggtgtttcatgaaatcaccaaaagcgcg
gttgagcatgcgattgcaaacccacgtgatattgctatgccgctggtaaacgcacagcag
gcaagacgcgcgctggattatctggtcggtttcaatttatcgcctttgctgtggaaaaag
attcgtcgcggcctatccgcaggccgtgtacaaagccctgcactacgattgatcgtagag
cgcgagcttgagattgaagcgttcaaaagccaggaatactggacgattcaccttgaatca
cgcaaacatcagcatgcgtttgacgccaagctggtgcagctagatggcaaaaaagtagag
caattcacgattaccaaccaagggcaagaagaagccgttgttggcaaactgttgcttgcc
agtgcaggtaaaactactgttacccgtgttgagaaaaaacagaaaaaccgcagtccagct
gccccattcactacctcaacattgcaacaagaagccgtgcgcaagctgggctttaccacc
agccgcgccatgcgcattgcgcagcagctatatgaaggtattgatgtaggcggcggtgca
gtcggcttgattacctatatgcgtaccgactctttcagcattgcgactgaagcggtgatg
cagatacgcgattacatcaaaaagaattttgatggtgagtacctgcctaaagcacccatc
atgtacaaaaccaaggcaaagaatgcgcaagaagcgcatgaagcgatacgcccaaccgac
atcacgcgctcgccagctagcttgagccatgtgctgacaccagaacaattcaagctgtac
gagatgatctggaaacgcgcgctagcttgccagatggcgcctgcacgattcgatgcagtg
agcgttgacttagccataggtagcgaagccaacctgttccgtgccaccggccagaccatg
atattccctggctttatcgctgtttacatggaaagtgtggacgacgctgaagaagaaggc
gaaagcaaattgccagtgctggaaactggcgaaattcttgacgtaaacaagatctttggc
gaccagcactttaccgaaccgccaccgcgttattcagaagccagcctggtcaaggtgctg
gaagagtacggcattggccgcccttctacctatgccagcattatctccaccctgcaagat
cgggaatatgtgttgctggataaaaagcgcttcacgccgaccgatgtaggccgcgtggtg
aataaatttctgacagaacatttcactaaatacgtggactatgattttactgccaacctg
gaaaacgagctggatgacatcgccgaaggtgcgcgcgaatggctgccggtgcttgatgct
ttctggcaaggctttaatacgcagattgttgccaagaaagatgttgagcgcccaggtacc
gaactaatagacgaagcctgcccgaaatgcggcaagccactttccaagcagttgagccgc
tatggtagctttataggctgcacaggttacaacgacacgcccaagtgtgactacaagcgc
agcatgaacggtgatggcgcagcaatgggtagtgagccagtcaagattggcgtagatacc
gaaagcggcaaagacatactgctgttggttggcccttatggcccgtatttgcaattgggc
ttgcctgaagaagatgcaaagaagaaacctaaacgcgtcagcatccccaaggatattgcc
ttggctgacgtcaatctggaagtcgccagcaagctgattgccctgccacgcgatttgggc
cagcaccctgagaccaacaagaaaatcgtggctaacatcggtcgctttggcccttatgtg
aatcatgatggcaagttcaaatcgattccgcgcacagatagcgtatttgatattgaccag
gcacgcgcagtagagctgcttgcacaagccaatactggcccagcgccaataagagagttg
ggcaaacacccaactgaagatggcgatattgcgatttattcgggtaagtttggcccatat
gtgcagcacttgaaactgcgtgctaccctgccgaaaagtgtagagcctgagagcattacg
ctggaagaggctttagaactgctaagcgccaaagcggcaaaagaagcagaaaacccaagc
aaaaagacgcgctcaagagctggggcgaaaaaagttgccagtaaatcagcccctgctaaa
aaagtggcagcgaaaaaaccgacagcagctaagaaagctgcatccaagaaaatagctgct
gtagcttaa
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