Methyloradius palustris: ZMTM_03020
Help
Entry
ZMTM_03020 CDS
T07445
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpau
Methyloradius palustris
Pathway
mpau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ZMTM_03020 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpau03021
]
ZMTM_03020 (rpoA)
03400 DNA repair and recombination proteins [BR:
mpau03400
]
ZMTM_03020 (rpoA)
Enzymes [BR:
mpau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ZMTM_03020 (rpoA)
Transcription machinery [BR:
mpau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ZMTM_03020 (rpoA)
DNA repair and recombination proteins [BR:
mpau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ZMTM_03020 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Ribophorin_I
Motif
Other DBs
NCBI-ProteinID:
BCM24043
UniProt:
A0A8D5JZT3
LinkDB
All DBs
Position
298811..299794
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSPTEYLKPRVVDVEVISPVRARVTLEPMERGFGYTLGNALRRVLLSSIPGFAITEVK
IDGVVHEYSTIDGVQEDVVDILLNLKGVALKLNSKSETTLILNKSVEGVVTAADFETGHD
AEIANPNHVIAHLTKGGKLNLEVKVQMGRGYQPVPARLKSDEDRVLGFIQVDASFSPISK
VSYHVESARVEQRTDLDKLVMDVETNGVVEPEQAIRDAARILMGQLAVFADLEGAPTEIE
VKNAPQVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRGENELLKAPNLGRKSLNE
IKDVLASKGLTLGMKLENWPPVGLEKI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtccgaccgaatatttaaagccacgtgtagtggatgttgaagttatttca
ccagtaagagcgcgtgtaactctagagcctatggagcgcggttttggctatacattaggt
aatgcgttgcgccgcgtattgttatcttcaattcctggctttgcaattactgaagtgaag
attgatggtgttgtgcatgaatactcaacgattgatggggttcaagaagatgtggttgat
attctactgaatctaaaaggcgttgcacttaaactgaacagcaaaagtgaaaccactttg
attctgaataagtctgttgaaggtgttgtaaccgctgctgactttgaaacgggtcacgat
gctgaaattgctaacccgaatcatgtgattgctcacctgaccaagggtggtaagctgaat
cttgaagttaaagtgcaaatgggtcgtggctaccagccagttccagcacgtttaaagtct
gatgaagaccgtgtactgggcttcattcaggtggatgcttctttcagcccaatcagcaag
gtaagttaccacgttgagagtgcacgcgttgagcaacgtaccgacttagacaagcttgta
atggatgttgagaccaacggtgttgttgaacctgaacaagcgattcgtgatgcagctcgt
atcttgatgggtcaattagctgttttcgctgatcttgaaggtgcacctacagaaatcgaa
gtaaagaatgcaccacaggttgatcctatcctgttgcgtccagttgatgatcttgaattg
actgtgcgttctgcaaactgcctgaaagctgaaaacatctactacattggtgatttgatc
caacgtggtgagaatgagttgttaaaagcgccgaatcttggccgtaaatctctgaacgag
attaaagatgtattggcttcaaaaggtcttacattgggcatgaagctggaaaactggcca
ccagttggtcttgagaagatttaa
DBGET
integrated database retrieval system
