KEGG   Methyloradius palustris: ZMTM_03340
Entry
ZMTM_03340        CDS       T07445                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mpau  Methyloradius palustris
Pathway
mpau03030  DNA replication
mpau03410  Base excision repair
mpau03420  Nucleotide excision repair
mpau03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ZMTM_03340 (polA)
   03410 Base excision repair
    ZMTM_03340 (polA)
   03420 Nucleotide excision repair
    ZMTM_03340 (polA)
   03440 Homologous recombination
    ZMTM_03340 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpau03032]
    ZMTM_03340 (polA)
   03400 DNA repair and recombination proteins [BR:mpau03400]
    ZMTM_03340 (polA)
Enzymes [BR:mpau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ZMTM_03340 (polA)
DNA replication proteins [BR:mpau03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ZMTM_03340 (polA)
DNA repair and recombination proteins [BR:mpau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ZMTM_03340 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ZMTM_03340 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: BCM24075
UniProt: A0A8D5G1Q5
LinkDB
Position
complement(327885..330641)
AA seq 918 aa
MKTLLLVDGSSYLYRAFHAMPDLRNKANEPTGAIQGVLNMLRRLHKDYPADYSACIFDAK
GKTFRDDIYPEYKANRAAMPDDLRPQIAPLHEAIRAMGWPLIVEDGVEADDVIGALAKQA
EREGVRVIISTGDKDISQLVNEHVTVVNTMRDAFRKTDEVLDVAGVENKFGIPPSLMIDY
LVLIGDTSDNVPGVEKVGPKTAVKWLKQYGSLDNIVAHADEITGVVGENLRKALSWLPTA
RELITIRCDVGIQENLADLAPQPQDRAKLAELFDRFDFKTWRRELDLPAAPANMPTATPA
PASTHASGDLFAAAAVHSRHYETILTEQDLSKWLDKISQAELVCFDTETTSLDPMTAKLV
GMSFATIAGEAAYLPLKHDYPGAPDQLPFEATLARIKPLLENAAIKKVGQNLKYDKHVLA
NLNIELNGITHDTLLQSYVLESHRSHGMDDLAMRHLGVQTITYAEIAGKGAKSVGFSQVA
LEQASEYAAEDADITLQLHESLYPQIKPDAKLDFIYSQIEMPSMEILFAIERNGVLIDSN
MLNKQSNEIGLKLMELERQAYELAGQPFNLGSPKQLQEILFDKLGIKSTKKTPSGAPSTD
EDVLQELALDHPLPKVLLEYRGLAKLKSTYTDKLPKMINAQTGRVHTSYNQAVAITGRLA
SSDPNLQNIPVRSTEGRRIREAFIAPAGSVIVSADYSQIELRIMAHLSQDEGMLQAFANN
EDIHRATAAEIFGVEREAVSNEQRRYAKVINFGLIYGMSAFGLAQNLNIERSAAATYIER
YFARYPGVRQYMQNTREIAKQNGYVETYFGRRLWVPEINSPNGMRRAGAERAAINAPMQG
TAADLIKLAMIAVQNWLVSGKLATKLIMQVHDELVLEVPENELALIKEKLPELMQNVAKL
DVPLLAEVGVGSNWEAAH
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgaaaacgttgttattagtggatggctcgtcctacctgtaccgcgcatttcacgccatg
ccagatttgcgtaacaaagccaatgagcccactggcgcgatacaaggcgtactcaatatg
ctacgccgtttgcacaaagattacccagccgattatagcgcgtgtatttttgacgccaaa
ggcaaaaccttccgtgacgatatttatccagaatacaaggccaaccgtgccgccatgccg
gatgacttgcgcccacagattgccccattgcatgaggcgattagagccatgggctggccg
ctgattgtagaagatggcgtggaagctgacgatgtgattggcgcgcttgccaagcaagca
gaacgcgaaggtgtgcgggtaatcatctccacaggggacaaagacatctcacaactagtg
aatgagcatgtcaccgtcgtcaataccatgcgcgatgcctttaggaaaaccgatgaagtg
ctggatgtcgcaggcgtagaaaacaaattcggcataccacccagcctgatgattgattat
ctggtcttgattggcgacacatcagacaacgtaccaggtgtagaaaaagttggcccaaag
accgctgtgaaatggcttaagcaatatggttctctggataatattgttgcccatgccgat
gaaatcacaggcgtagtcggtgaaaacctgcgcaaggctttatcttggctaccaacagca
cgcgaactcatcaccattcgctgtgatgtcggcatacaggaaaacttggctgaccttgcc
ccgcagccacaagacagagccaaactcgcggagttatttgaccgcttcgacttcaagact
tggcgacgtgaacttgatttacctgctgctccagcaaatatgcctactgcaacacctgca
cccgcctctactcatgcttctggcgatttattcgcggctgccgctgtacatagccgtcat
tatgaaaccattcttaccgagcaagatttaagcaaatggctggataaaatcagccaggca
gaactcgtttgtttcgatactgaaactacatcacttgacccgatgacagcaaaactggtc
ggcatgtcattcgccaccatcgctggcgaggcggcttatttaccactcaagcatgattac
ccgggtgcacctgaccaattgccgtttgaagcgacgctggctcgcatcaaaccgttgctg
gaaaatgccgccattaaaaaagtcggacaaaaccttaaatacgacaaacatgtgctcgct
aacctgaatattgaattaaacggcatcacccacgatactttgctgcaatcctatgtattg
gaaagccaccgcagccacggcatggatgaccttgccatgcggcaccttggcgtacaaacc
atcacctatgcagaaatcgcaggcaaaggcgcaaagtctgttggtttttcacaggtcgcg
ctggaacaagccagcgaatacgccgcagaagatgccgacattacactgcaattgcatgaa
agtttgtatcctcaaattaagccagatgccaagctagacttcatttatagccagattgaa
atgccatcaatggagattttattcgccatcgagcgcaacggcgtattgatagacagtaac
atgctgaacaagcaaagcaacgaaatcggcctaaagttgatggagttggaaagacaggct
tatgaacttgctgggcagccatttaacctaggctcacctaaacagttgcaggaaatcctg
ttcgataaactgggcataaaatccaccaagaaaacgccaagcggcgcaccatctaccgat
gaagatgtgttgcaggagttggcgctagatcacccactgcccaaagtgttattggaatat
cgcggattagcaaaactcaaatcgacctacaccgacaaactacccaagatgatcaacgca
caaactggtcgcgtgcacaccagctacaaccaggcagtcgcaattacagggcgcctggcc
agttcagaccccaatctgcagaatattccagtgcgcagcaccgaaggccgccgtatccgc
gaagcctttattgcaccagcaggcagtgtgattgtctctgccgattattcgcaaattgaa
ctgcgcatcatggcgcacttgtcgcaagatgaaggcatgctgcaagcctttgctaacaat
gaagatatccaccgcgccaccgctgccgagatttttggcgttgagcgcgaagctgtcagc
aacgaacaacgccgctatgccaaagtcatcaatttcggcctgatctacggcatgagcgca
tttggtttagcgcagaatctgaacatcgaacgaagcgccgcagccacctatattgaacgc
tacttcgcgcgctatccgggcgtacgacaatacatgcaaaacacccgcgaaatcgcaaaa
cagaatggctatgtagaaacctatttcggccgccgtctatgggtaccagagatcaacagc
cccaacggcatgaggagagcgggcgctgaacgtgccgccatcaacgccccaatgcaaggc
accgccgctgacctcattaaactcgccatgattgcggtacaaaactggctagtcagcgga
aaactagcgaccaaattgattatgcaagtacacgatgagctagtgctggaagtgccagaa
aacgagctggcactgattaaggaaaagctaccagaacttatgcaaaacgtagcgaaactg
gatgtgcctttgttggcagaggtgggggtaggcagtaactgggaagcagctcattaa

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