Methyloradius palustris: ZMTM_03410
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Entry
ZMTM_03410 CDS
T07445
Symbol
cpn60
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mpau
Methyloradius palustris
Pathway
mpau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZMTM_03410 (cpn60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpau03019
]
ZMTM_03410 (cpn60)
03110 Chaperones and folding catalysts [BR:
mpau03110
]
ZMTM_03410 (cpn60)
03029 Mitochondrial biogenesis [BR:
mpau03029
]
ZMTM_03410 (cpn60)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpau04147
]
ZMTM_03410 (cpn60)
Enzymes [BR:
mpau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ZMTM_03410 (cpn60)
Messenger RNA biogenesis [BR:
mpau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ZMTM_03410 (cpn60)
Chaperones and folding catalysts [BR:
mpau03110
]
Heat shock proteins
HSP60 / Chaperonin
ZMTM_03410 (cpn60)
Mitochondrial biogenesis [BR:
mpau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ZMTM_03410 (cpn60)
Exosome [BR:
mpau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ZMTM_03410 (cpn60)
Exosomal proteins of other body fluids (saliva and urine)
ZMTM_03410 (cpn60)
Exosomal proteins of breast cancer cells
ZMTM_03410 (cpn60)
Exosomal proteins of colorectal cancer cells
ZMTM_03410 (cpn60)
Exosomal proteins of bladder cancer cells
ZMTM_03410 (cpn60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SAM_GIDA_C
Motif
Other DBs
NCBI-ProteinID:
BCM24082
UniProt:
A0A8D5G6I9
LinkDB
All DBs
Position
complement(336942..338585)
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKQVIFGDEARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDRLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPADLKRGI
DKAVIAIVEEIKKISKPTTTSKEIAQVGSISANSDFHIGQIIADAMDKVGKEGVITVEDG
SGLENELDVVEGMQFDRGYLSPYFINNPERQIALLENPFVLLFDKKISNIRDLLPTLEQV
AKSGRPLLIIAEDIEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGTV
IAEELGLKLENVKLEDLGQAKRIEVNKDNTIIIDGAGVENNIKVRIDQIKKQIEEASSDY
DREKLQERVAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARSAIKELKGDNPDQDAGIKIVLRAIEEPLRQIVANAGDEPSVVVNKVLEGTGNYGYNA
ANGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAELPKDDAPSMGGGDMGGM
SGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaacaagtaattttcggcgatgaggcacgtgccaaaatcgttaatggtgtg
aacattctggctaacgccgttaaagtaacactgggccctaaaggccgtaacgtagtgttg
gagcgttctttcggcgccccaaccgtgacaaaagatggcgtttcagtggctaaagaaatt
gaattaaaagaccgccttgaaaacatgggcgcgcaactggttaaggaagttgcttctaaa
acttctgacaacgcaggtgacggcaccactaccgctactgtattggctcaagctatcgtt
cgtgaaggtttcaagtacgtagctgcaggttttaacccagccgacttgaagcgcggtatt
gataaggctgtgattgccatcgttgaagaaatcaaaaagatttcaaaaccaacaaccacc
agcaaagaaatcgctcaagttggtagcatttcagccaactctgatttccatatcggccag
atcattgctgatgccatggacaaagtaggtaaagaaggtgtgattactgttgaagatggt
tcaggtctggaaaatgaactggacgtagttgaaggtatgcagtttgaccgcggttaccta
tcaccatacttcatcaacaacccagagcgtcaaatcgctttgctggaaaacccattcgta
ctattgttcgacaagaaaatctcaaacatccgtgatttactgccgacactagaacaagtc
gctaagtctggccgtccattgctgatcatcgctgaagatatcgaaggcgaagctttggca
accctggttgtgaacaacatccgcggcattctgaagactgttgctgttaaggcacctggt
ttcggtgaccgtcgcaaagccatgctggaagatatagctatcttgaccggcggtacagtg
attgctgaagaacttggcttgaagcttgagaatgtgaagctggaagacttgggccaggca
aaacgtattgaagtgaacaaagacaacaccatcatcattgatggcgctggcgttgaaaac
aacatcaaagtacgtatcgaccaaatcaagaagcaaatcgaagaagctagcagcgattat
gaccgtgaaaaactgcaagaacgcgtagccaagttggctggtggcgttgctgtgatcaag
gttggcgctgctaccgaaatcgaaatgaaggaaaagaaagcccgcgttgaagatgcattg
catgcaacacgtgcagcagttgaagaaggtattgttccaggcggcggtgttgccctgtta
cgcgcccgttcagctatcaaggaactcaaaggcgacaatcctgatcaagatgctggcatc
aagatcgtattgcgcgcgattgaagagcctttgcgccaaatcgttgccaacgctggtgac
gaaccatcagtagtggttaacaaagtacttgaaggtacaggcaactatggttacaacgcg
gccaacggcacctatggtgacttggttgaacttggcgtacttgatccagctaaggtaact
cgttcagcattgcaaaatgcagcttcagttgcttcactgatcctgactaccgatgcattg
gtagcagaactgcctaaggatgacgcaccttctatgggtggcggtgatatgggcggtatg
agtggcatgggcggtatgatgtag
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