Methyloradius palustris: ZMTM_07880
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Entry
ZMTM_07880 CDS
T07445
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
mpau
Methyloradius palustris
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpau03000
]
ZMTM_07880
Transcription factors [BR:
mpau03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ZMTM_07880
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
BCM24529
UniProt:
A0A8D5FYK7
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Position
complement(839248..840141)
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AA seq
297 aa
AA seq
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MNITFRQMNVFLAVAQLKSITAAAEACYVTQPTVSMQMKELTDTIGLPLYEQIGKRLHLT
EAGESLAETAQAMTEEWSRFEQTIEAMKGHKKGRLRVAVASTAKYFVPRILGDFCHAYPE
VDISLEVLNRDGVVQRLKENADDLYIMSIPPEDMALEKQAFMENPLVVIAPINHALAYQT
GLSLKSLENESFVLRERGSGTRLACNRHFEEHQFKPKVRLELGSNEAIKQAVAGDLGLGV
ISRHALAGKAENEGLAVLDIETFPIHANWWLLYPQGKKLSPIAKEFIAHLQATAHKL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaatattacttttaggcagatgaatgtgtttctggctgttgcacaacttaaaagtatc
accgctgcggctgaagcttgctacgtcacacaaccgacagtgtccatgcaaatgaaggag
ctcacagataccattggcttgccactttacgagcaaatcggcaagcgcctgcacctgaca
gaagcgggtgaatctcttgcagagacagcacaagccatgaccgaagaatggagccgcttt
gaacaaaccatagaagcgatgaaagggcataaaaaaggccgactgcgcgtagccgttgcc
agcacggccaaatactttgtaccacgcatactgggtgacttttgccacgcttacccagaa
gtggatatctcactcgaagtgcttaaccgcgatggcgtggttcaacgcctgaaagaaaat
gctgatgatctttacattatgtctatcccgccagaggacatggcgctagagaagcaagcg
tttatggagaacccgttagtcgtcattgcaccgatcaatcatgcgcttgcgtatcaaaca
gggttgagcctcaaatcacttgaaaatgaatcatttgtgctgagagagcgtggctctggc
accagactcgcctgcaacagacactttgaggaacatcaatttaaacccaaagtcaggctg
gagctgggcagcaatgaagcgatcaaacaagcagtagctggcgaccttggtttgggcgtg
atttcacgacacgctttggctggaaaagcagaaaatgaaggcctagccgtacttgatatt
gagacgtttccgatacacgccaactggtggttactatatccgcaggggaaaaaactttcg
cccattgctaaagagtttattgcccatttacaagccacggcacataagctttaa
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