Methyloradius palustris: ZMTM_11400
Help
Entry
ZMTM_11400 CDS
T07445
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mpau
Methyloradius palustris
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpau03016
]
ZMTM_11400 (truA)
Enzymes [BR:
mpau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ZMTM_11400 (truA)
Transfer RNA biogenesis [BR:
mpau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ZMTM_11400 (truA)
Prokaryotic type
ZMTM_11400 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
Stealth_CR3
Motif
Other DBs
NCBI-ProteinID:
BCM24881
UniProt:
A0A8D5JQW5
LinkDB
All DBs
Position
1232454..1233236
Genome browser
AA seq
260 aa
AA seq
DB search
MRIALCLEYDGQHFCGWQSQPSGCGIQDALEKALEVLALHKVRVIAAGRTDTGVHALSQV
VHFDTETMRAEDSWVRGVNAHLPKTLRVQWAKEVDARFHARFDAQARSYQYLLINQATAP
AIMSGKAGWFHFPLNLNLMREATGYLIGEHDFSAFRAADCQAKSPVKHLYNADIHVDGTS
LIFSFSGNAFLHHQVRNMMGALIYVGKGKYPPDHIKTLLEARDRTASPPTFSPDGLYLTG
VKYDPIWNLPNTHRQIKTVI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgctttatgtcttgaatatgatggccagcacttctgcggatggcagagtcag
ccttctggctgtggcatacaggatgcccttgaaaaagcattagaagtcttagcgttacat
aaagtcagggtaattgcagcagggcgcactgatactggcgtacatgcactatcgcaagtt
gtgcattttgataccgaaactatgcgcgccgaagactcttgggtgcgcggtgtgaatgcg
cacctgcctaaaacattgcgggttcaatgggcaaaagaggtcgatgccaggtttcatgcg
aggtttgatgcgcaggcgcgcagttatcaatatttattgattaaccaagcaacagcacct
gcaatcatgtctggtaaagcgggctggtttcattttccgttgaatttaaacctgatgaga
gaggctacaggttatttaataggggagcatgatttcagtgcttttcgggccgcagattgc
caagctaagtctccagtcaaacatttatataatgcagatatacacgtcgatggtactagc
ctgatttttagtttctctggcaatgcgtttttacatcaccaagtgcgtaatatgatgggt
gcgttgatatatgtgggcaaagggaagtatccgccagaccacatcaaaactttgctagaa
gcccgcgatagaacagcttcgccacctacattttcaccagatggcttatatcttacaggc
gttaaatatgaccccatttggaatttgcctaatactcatcgtcaaataaagaccgtcatt
tag
DBGET
integrated database retrieval system
