Methyloradius palustris: ZMTM_12230
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Entry
ZMTM_12230 CDS
T07445
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mpau
Methyloradius palustris
Pathway
mpau03030
DNA replication
mpau03430
Mismatch repair
mpau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZMTM_12230 (dnaQ)
03430 Mismatch repair
ZMTM_12230 (dnaQ)
03440 Homologous recombination
ZMTM_12230 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpau03032
]
ZMTM_12230 (dnaQ)
03400 DNA repair and recombination proteins [BR:
mpau03400
]
ZMTM_12230 (dnaQ)
Enzymes [BR:
mpau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ZMTM_12230 (dnaQ)
DNA replication proteins [BR:
mpau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ZMTM_12230 (dnaQ)
DNA repair and recombination proteins [BR:
mpau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ZMTM_12230 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BCM24964
UniProt:
A0A8D5FZ90
LinkDB
All DBs
Position
1330395..1331108
Genome browser
AA seq
237 aa
AA seq
DB search
MRQIFLDTETTGLYPAQGHRIIEIAGVEVINRRITRNHFHVYLNPDREIDPAAQEVHGIT
LEFLQDKPHFIDVVDEFLDFVKDGELVIHNAPFDVGFLNAELGKIDRPKIETSTCNIIDT
LKMAKEMRPGQRNNLDALCRHFGVNNSKRTLHGALLDAELLADVYLAMTRGQESLMMDMH
ESSVTFDNGATRLENHVFRVIKAEGDDLIAHEDYLKGLDKNSPSVWTTIQKPQESTE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaatattcctcgatacagaaactacgggcttatacccagcgcaaggtcatcga
attattgagattgccggagttgaggtaataaaccgacgcatcacccgtaatcatttccat
gtgtacttaaatccagatcgtgaaattgaccctgcagcgcaagaagtgcatggcatcacg
ctcgagtttttgcaggataaaccgcactttattgatgtggttgatgagtttcttgatttc
gtaaaagatggtgagctagttattcataacgcgccattcgatgtgggctttctgaatgcc
gagttaggcaaaatagatcgcccaaagattgagacttcaacgtgcaatattatagatacc
ttgaaaatggctaaggagatgcgtcctggtcagcgtaataatctggatgcgctttgccgt
cactttggcgtgaacaactcaaaacgcacattgcatggtgctctgctggatgctgagttg
ctagcagacgtataccttgccatgacacgcggtcaggaaagcctgatgatggacatgcat
gaatcatcagttacatttgataacggcgctactcggctcgaaaaccatgtttttcgagtt
atcaaagcagaaggcgatgatcttatagcccacgaagattatctaaaggggttagataaa
aatagcccctctgtatggacgacaatccagaaaccgcaagaaagtactgaatga
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