Methyloradius palustris: ZMTM_12330
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Entry
ZMTM_12330 CDS
T07445
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mpau
Methyloradius palustris
Pathway
mpau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ZMTM_12330 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpau03019
]
ZMTM_12330 (orn)
03009 Ribosome biogenesis [BR:
mpau03009
]
ZMTM_12330 (orn)
Messenger RNA biogenesis [BR:
mpau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ZMTM_12330 (orn)
Ribosome biogenesis [BR:
mpau03009
]
Eukaryotic type
Pre-60S particles
RNases
ZMTM_12330 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
BCM24974
UniProt:
A0A8D5JWD1
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All DBs
Position
1337624..1338184
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AA seq
186 aa
AA seq
DB search
MEIIMSQDNNNLIWLDMEMSGLLPDTDRIIELAAVVTDANLNVLGESPVLVVHQSDAVLD
GMDAWNKGTHGRSGLIDKVKTSTLDEAAASQIMIDFLKPFVGAGKSPMCGNSICQDRRFM
ARYMPELEAFFHYRNLDVSVFKELARRWKPTVYSGFKKASKHEALADIYESIDELKYYRE
HFIKLD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcattatgtcacaagataacaacaacctcatctggctagatatggaaatgagc
ggcttactgccagataccgatagaattattgagctggcagcagtagtgaccgatgctaac
ttgaatgtgcttggtgaatctcctgtgctagttgtgcaccaaagtgatgcggttctggat
ggcatggatgcctggaataaaggtacgcatggtcgttcagggctaattgataaagtgaaa
acatcaacattagatgaagctgctgcttcacaaatcatgatcgattttctgaaaccattt
gtaggcgctggcaaatcgccgatgtgcggtaattctatctgccaagatagacgcttcatg
gcgcgttacatgccagagctagaagcttttttccattatcgtaatctggacgtcagcgta
ttcaaagagctggcaagacgctggaaacctacagtttattcagggttcaagaaagccagt
aaacatgaggcactggctgatatctatgaatcgattgatgagcttaaatactatcgcgag
cacttcattaagcttgattga
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