Methyloradius palustris: ZMTM_14500
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Entry
ZMTM_14500 CDS
T07445
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpau
Methyloradius palustris
Pathway
mpau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZMTM_14500 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpau03019
]
ZMTM_14500 (recQ)
03400 DNA repair and recombination proteins [BR:
mpau03400
]
ZMTM_14500 (recQ)
Enzymes [BR:
mpau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZMTM_14500 (recQ)
Messenger RNA biogenesis [BR:
mpau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ZMTM_14500 (recQ)
DNA repair and recombination proteins [BR:
mpau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ZMTM_14500 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
BCM25191
UniProt:
A0A8D5G8Q3
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All DBs
Position
1561628..1563463
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AA seq
611 aa
AA seq
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MQKEFILTEALTTLHKVFGYSEFRGKQQAVVEHVCSGGDALVLMPTGGGKSLCYQLPALL
RDGLAIVVSPLIALMQNQVEALQQLGIEAAYLNSSLNAEETQRITSQVLAGQTKILYVAP
ERLMVNSFLSLLQQVDTHVRLALFAIDEAHCVSQWGHDFRPEYRQLTILHDRFPHVPRIA
LTATADAPTRAEIVEQLSLENAEQFVSSFDRPNIRYRITQKNNARQQLLHFLETEHSDDA
GIVYCLSRKKVEETAAWLKDQGWKALPYHAGLDSKIREANQRKFLQEEGVVMVATVAFGM
GIDKPNVRFVAHLDIPKSMEGYYQETGRAGRDGLGANAWMTYGLGDVVSMRQMLDSGDAP
EERKRVERQKLDALLGFCESTSCRHQTLLRYFGEEHPGDCGQCDNCLTPVDTWDATQASQ
MALSCVYRTGQRFGVVHLIDVLLGKNTPRIEQFGHQQLSTFGIGKALTQTQWSSIFRQLV
AVGFLESDITSYGGLKLTELAKPVLRSEQEVWLRRDVEVTQRKTSKAERASRSKEAYAGA
NEDPLWQALKDKRMELAKEQGVPPYLIFHDSTLLEILNQKPQTLDDLAKISGVGQAKLLR
YGDAFLEVLAD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagaattcatcttgaccgaagcgctaacaaccttacacaaggtatttggttac
agtgagtttcgcggcaagcagcaagctgtagtcgagcatgtttgctcgggtggtgatgca
ttggtattgatgcctacaggcggcggtaaatctttatgctatcagctacctgccctattg
cgtgatggcttggccattgtagtttcccccctcatagccctgatgcaaaaccaggtagag
gccttgcagcaactaggtattgaagccgcttatctaaactcgagcctgaatgcagaagaa
acccagcgcataacttcgcaggtgcttgcaggccagaccaagattttatatgtggcgcct
gagcgcttgatggttaatagctttttaagcctgttacagcaagtcgatactcatgtgcgc
ctcgcgctgtttgctattgatgaggcccattgcgtatcgcaatgggggcatgattttcgg
cctgaatatcgccagctcactatcctgcatgatcggtttccgcatgtgccacgcatcgcc
ctaacagccacagcagatgcgcctacccgtgcagagattgtagagcagttatcgctcgaa
aatgcagagcagttcgtttccagttttgaccgtcccaatattcgataccgcatcacccag
aaaaacaatgcacggcaacagttactgcattttcttgaaacagaacattctgatgatgcg
ggtatcgtctattgcctgtcacgtaaaaaagtagaagagactgcagcctggctgaaagac
caaggctggaaagccctgccctatcacgcaggcctcgatagcaaaatacgtgaagccaac
cagcgcaagtttttgcaggaggaaggcgtcgttatggttgcgaccgtagctttcggcatg
ggcatagataaacctaacgtgcgcttcgtggcgcatctcgacatacctaaaagtatggaa
ggctattatcaggagacggggcgtgctgggcgtgatggcttgggtgccaatgcgtggatg
acctatggattaggcgatgtagtctccatgcgccagatgctggattctggcgatgcgcca
gaagaacgcaaacgcgtagaacgacaaaagcttgatgccctacttggcttctgcgaatcc
actagctgtcgccaccagaccttgttacgttatttcggcgaggagcatcctggtgattgt
ggtcaatgcgataactgcctgacccctgtggatacttgggacgccacacaagcctcacaa
atggcgctctcttgcgtgtatcgcacaggacaacgctttggcgtagtgcatttaattgat
gtgttacttggcaagaacacgccaagaattgagcaattcggccatcagcaactgagcacg
tttggtataggcaaggctttaactcaaactcagtggagcagcatctttcggcaattggtc
gcagttggatttcttgaatcagacattacgtcttatgggggactaaagctgaccgaatta
gcaaaaccagtattgcgcagcgagcaggaagtctggttaagacgagatgttgaagttacc
caaagaaaaaccagcaaggccgagcgtgcgtcacgcagcaaagaagcttacgcaggcgct
aatgaagatccactgtggcaagcactcaaagataaaagaatggagctggcaaaagagcaa
ggcgtgcctccttacctgattttccatgatagtaccttactggaaatactaaaccagaaa
ccacaaacgctggacgatctggcaaagatcagtggtgttggtcaggctaaattactgcgg
tatggagatgcatttctagaggtactggcagattag
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