Methyloradius palustris: ZMTM_15740
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Entry
ZMTM_15740 CDS
T07445
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mpau
Methyloradius palustris
Pathway
mpau03030
DNA replication
mpau03430
Mismatch repair
mpau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZMTM_15740 (dnaE)
03430 Mismatch repair
ZMTM_15740 (dnaE)
03440 Homologous recombination
ZMTM_15740 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpau03032
]
ZMTM_15740 (dnaE)
03400 DNA repair and recombination proteins [BR:
mpau03400
]
ZMTM_15740 (dnaE)
Enzymes [BR:
mpau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ZMTM_15740 (dnaE)
DNA replication proteins [BR:
mpau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ZMTM_15740 (dnaE)
DNA repair and recombination proteins [BR:
mpau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ZMTM_15740 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BCM25315
UniProt:
A0A8D5JLY4
LinkDB
All DBs
Position
complement(1702760..1706209)
Genome browser
AA seq
1149 aa
AA seq
DB search
MQQPTFIHLRCHSEYSIVDGTVRIDDYVKHAQKDQMPALALTDLSNLFGAVKFYKAARGK
GIKPLLGCDIWLENESKRDQPYRLLLLCQTHAGYLRLCELLTRAYLNNQYRGRAEIKRQW
LVDESTDGLIVLSGAMFGDIGHALMQGNQGLAKQLAQDWNAAFPDRFYIELQRAGHAQQE
AYISQAIALASDANLPLVATHPIQFIETEDFKAHEARVCISEGYVLADNRRPKVFTPAQY
FKTQTEMAELFADIPEALANSVEIAKRCNLTLTLGKNYLPQFPTPNGESLDDYLIAQARI
GLEKRLEVLYPDQTVRDARRQEYEDRLTFEASIIIQMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSVVAYSLGITDLDPLRYALLFERFLNPERVSMPDFDIDFCQEGRDRVIDYV
KEKYGRESVSQIATFGTLAAKAVIRDVGRVLDLPFNFVDSIAKLIPNELGITLSEAIKKE
PQFNERREQEEEVNELLELALRLEGLTRNVGMHAGGVLISPGKISDFSPIYCQANGDSLV
SQYDKDDVEAVGLVKFDFLGLRTLTILDMALENTNAQRALEDLPPLSFETLPIDDAPTYK
LLKLANTTAVFQLESRGMKDMLKQAKPDCFEDIIALVALYRPGPMDLIPDFCRRKHGLQR
VEYPHPLAEPILKETYGIAVYQEQVMQIAQVVAGYSLGGADLLRRAMGKKKPEEMDAQRK
IFVEGATKNGLTERQASELFDTLEKFAGYGFNKSHAAAYALVAYHTAYLKTHYPAAFLAA
TMSADMNNTDSVNIFHADCAANGVEVLAPDINQSEFRFKPLNQTQVLYGLGAVKGTGWAA
IELMLAALEQDGPFKDLFDFCRRLDLRKVNRRVIESLIRAGAFDKLEPSRAALLAGVNLA
ITAAEQSGAATGQDSLFGITTDSVAHTLPKVPPWSEQERLQQEKIALGFYLSGHPYLGYK
KELSTFVRGGLADLKPQEQPQLLAGVVMGVRIRMTARGKMAIVTLDDATSRIEIVVGNEL
LNQNPQLLKDDVLLIVEGRVSNDDFSGGLRVNARKLYDLAAARGAYASLLKISCNGQADA
VKLRDLLSPYCRNTGGENRRGCAVKVEYHNSDARVEIMLGEQWRVELHDELLAGLKGWLS
EENVKILYN
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccgacttttatccacctgcgttgccacagtgagtattccattgtggatggt
acagtgcgcattgacgattacgttaaacacgcgcaaaaagaccaaatgccagcgctggca
cttaccgatcttagcaacctgtttggcgcagtaaagttttataaagcagcgcgtggcaag
ggcattaaaccattgctcggttgcgatatctggcttgaaaacgaatccaagcgcgaccag
ccttatcgtttacttttgctgtgtcaaactcatgcaggataccttcgcctgtgtgaattg
ctgacacgcgcttatctaaataatcaatatcgtgggcgcgctgaaatcaagcgccaatgg
ttagttgatgaatccacagatggcctgatcgtactttcaggcgcgatgtttggcgatatt
ggtcatgccttgatgcagggtaatcaaggcttggctaagcaacttgcgcaagactggaac
gcagcttttccagatcgtttctatatcgagttgcaacgtgcaggccacgcccaacaagaa
gcctatatatcacaagcaattgcgctggccagcgatgctaacctgccgctggttgccacg
cacccaatccaatttatagagactgaagacttcaaggcgcacgaggcacgtgtgtgcatc
tctgaaggctatgtgctcgctgataaccgccgtcctaaagtatttactccagcgcaatat
ttcaaaacacagacagaaatggctgagttatttgcggatattccggaggcgctggctaat
agtgtagagatcgctaaacgctgcaaccttactttgacgctgggcaaaaattatttgcca
caattccccacgcctaatggcgaaagtctggatgattacctcattgcacaggccagaatt
ggccttgagaagcgcttggaagtgctctatccagatcaaacagtgcgtgatgcgaggcgg
caagaatatgaagatcgattaacgtttgaagccagtatcatcatccagatgggtttccca
ggttatttcctgatcgtggcagattttatcaactgggcgaagaataacggcgtgcctgtt
ggcccaggccgtggttctggcgctggttctgtggtggcttacagcttgggtattaccgac
cttgatccactgcgatatgccttgctgtttgagcgtttcctgaatccagagcgtgtctct
atgcccgactttgacatcgacttttgtcaggaagggcgcgaccgcgttattgattatgtg
aaagagaagtacggtcgcgaatcagtttcgcagatcgccaccttcggtaccttggcggcc
aaagcagtaattcgtgatgttggccgtgtgttggatttgcccttcaattttgtcgatagc
atcgccaagctgattccaaacgagttgggtatcaccctaagcgaagctattaagaaagag
ccgcagtttaatgagcgacgcgagcaggaagaagaagttaatgagttgctcgagcttgcg
cttaggcttgaaggtctgacccgtaatgtgggcatgcacgcaggtggcgtactgatttca
cctggcaagatttctgacttctccccaatctactgccaagccaatggcgacagccttgta
agccaatatgataaagatgatgtggaagccgtaggcctagtcaaattcgacttcttaggc
ctgcgtaccctgaccatactagatatggctctggaaaacaccaatgcccagcgcgcgctt
gaagacctcccaccgctctcgtttgaaaccttgccgattgacgatgcgcctacctataag
ttgttaaagctggccaataccaccgcggtattccagcttgaatcgcgcggcatgaaggac
atgttgaagcaggcaaagcccgattgctttgaggatatcattgcgttggttgcactatat
cgtccaggcccaatggatttgatccctgatttttgccgtcgtaaacacggcttgcaacgt
gtggaatatccacatccactagcagaaccgattctgaaagagacttacgggatcgccgtc
tatcaagagcaggtgatgcagatcgcacaagttgtggcgggttacagcttgggcggcgcg
gatttactacgtcgcgctatgggtaagaaaaagccagaagaaatggatgcccagcgcaag
atttttgtagaaggcgctaccaaaaacggcttaactgagcgtcaggcaagtgaactattt
gatacgctagagaagttcgctggctacggattcaacaaatcgcacgccgccgcttatgct
ttagtggcataccatacggcttacctcaaaacacattatcccgctgcattcttggcagcc
accatgtctgccgatatgaataatacagacagcgtgaatattttccatgctgattgtgcg
gcgaatggggtagaggtgttggcacctgatatcaaccagagcgagttccgctttaagccg
ctgaaccaaacgcaagtattgtatgggttgggcgcggttaaaggtactggctgggcggca
atagaattaatgttggcagcccttgagcaagatggcccattcaaagatctgttcgatttc
tgccgtcgccttgatttgcgcaaggtgaatcgccgtgtgattgaatcactgattcgtgcg
ggggcttttgataagcttgagccaagccgtgctgctttgctggcaggcgtaaatctggct
attactgcagcagagcagagtggggcagctactggtcaagatagcctgtttggcatcacc
acagactccgtggcacataccttgccgaaggtgccgccttggtcagagcaagagcgtttg
cagcaggaaaagattgctttgggcttttatctgagtggccacccttatcttggctacaaa
aaagaactctcaacctttgtgcgtggcggcttggctgacttgaaaccgcaagagcagcca
cagctattggcaggcgtggtgatgggcgtgcgtatccgtatgacagctcgtggaaaaatg
gcgattgttacccttgatgacgctacctcacgtattgaaatcgtagttggcaatgagttg
ctcaaccagaacccacagctgctaaaagacgatgtgctgttaattgtggaagggcgcgtc
agtaatgacgacttttctggaggcttgcgggttaatgcgcgtaagctgtacgacctagct
gctgcacgcggtgcgtatgccagcttgcttaaaatctcttgcaatgggcaggcggatgcc
gtgaaattacgtgatctattaagtccatattgccgtaatacaggtggagaaaatcgccga
gggtgtgctgtgaaagtggagtaccataattcggatgcacgcgtcgaaatcatgctcggg
gagcaatggcgcgtggagttacatgatgaattattggcgggccttaaaggctggttaagc
gaagaaaacgtaaaaatcctctataattag
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