Methyloradius palustris: ZMTM_15860
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Entry
ZMTM_15860 CDS
T07445
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mpau
Methyloradius palustris
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpau03016
]
ZMTM_15860
Enzymes [BR:
mpau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ZMTM_15860
Transfer RNA biogenesis [BR:
mpau03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ZMTM_15860
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
BCM25327
UniProt:
A0A8D5G8Y5
LinkDB
All DBs
Position
complement(1719729..1721615)
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AA seq
628 aa
AA seq
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MNVFFEEDGSFKVASVMSEAAGSLQIESPSGKRSKIKASNVLMRFESALSGFMEAVQQEA
ETLETEFLWECCGEPEFGFEELAQEYYGKKPTAIEAAAVAVKLHGAPVYFYRKGKGHYKA
APPETLKAALAALEKKRLQAEKIATYAAQLKAGELPEDFKGEAFKDKLDMLLYAPDKNTL
EWKALEQASAETHTSHIKLLEACGAISSIHDYHLGAFLREYFPHGSAFPPHDLVNSPDNL
PRAEVEVFSIDDSTTTEIDDALSVQHLADGTTRVGIHIAAPSLGIPLNGTVDAIAMHRLS
TVYMPGHKITMLPDSVVEPFSLNAGEWRPALSLYLDVAADLTITHRESKVELVKVADNLR
HDELEPFFNEHTLEQDSGHPYWAKLLYLFRLAESLEKGRGKHDPNRAIHIDYNFYVNDGV
VSIQGRRRGSPMDKLVAELMIEANSQWGLLLAEHDVPGIYRAQNGGKVYMTVKAEPHQGL
GVSQYAWSTSPLRRAVDLINQRQVISVLNNELPAYPKNSDDLVAAMRNFDQTYNAYSEFQ
TRMERYWCLQYLIQENITEIEATVWRENLVRLQNIPYITKVHGMPELAAGTQVKLEIKRV
DTLLLELETRFVALANVETTVEEVAGVA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtattttttgaagaagatggcagctttaaagtagcttctgtgatgtcagaggcg
gctggctcgctacaaatcgaatcgcctagcggcaagcgctcgaagattaaagcatctaat
gtattgatgcgctttgagagcgcattgtcaggctttatggaggctgtgcagcaagaagcg
gaaacgctagagacggaatttctatgggaatgctgcggtgagcctgagttcggttttgaa
gagcttgcccaagaatattacggtaaaaagccgacggcaatagaagcggctgctgttgca
gtcaaactgcatggtgcgcctgtctatttttaccgcaagggcaaaggccattacaaagca
gctccccctgaaaccttaaaggctgcgctagccgcacttgagaagaagcgcttgcaagcc
gaaaaaatcgctacctatgcagcccaacttaaagctggtgagttgcccgaagatttcaaa
ggtgaagcctttaaagacaagctggatatgctgctttatgcgcctgacaaaaatacgctg
gagtggaaagcgctggagcaggcctccgctgaaacgcataccagccatatcaagctgcta
gaagcgtgcggtgcgatcagctcgattcatgattatcacctaggtgcatttttgcgcgag
tattttcctcatggttcagcgtttccaccgcatgatctggtcaacagccctgataatctg
ccgcgcgctgaagttgaagtgttcagtatcgacgatagcactaccaccgagatcgatgat
gcattatcagttcagcatctcgctgatgggacgacacgggttggcattcatatcgccgcg
ccttcgctgggtattccactcaacggcacggtggatgcgattgccatgcatcgcctgtct
accgtctatatgccaggccacaagatcaccatgctgcctgatagcgtggttgagccattc
agcctgaatgcaggtgaatggcggcctgcgctttcgctgtacctggatgtggcagcggat
ttgactattacacatagggaaagcaaggttgaactggtgaaagtggccgacaacttgcgc
catgacgaactcgagccatttttcaatgaacatacgctagaacaggatagcggccatcct
tattgggccaagctgctttacctgttccgtcttgcggaatcgctcgaaaaaggccgcggt
aaacatgaccctaatcgtgcaatacatatcgactacaatttctatgtgaatgatggcgtt
gtgagtatccaaggtcgccgccgtggttcgcctatggataaactggttgcagagctgatg
atagaagccaatagccaatggggtttgttattagctgaacatgatgtgccgggcatctat
cgagcgcagaatggcggcaaggtgtacatgacagtcaaagccgagccgcatcagggtctg
ggtgtcagccagtatgcctggagcacttcgccgctgcgccgtgcagttgatttgatcaac
cagcgacaagtgatttcggtgctgaataacgaattacccgcttatcccaaaaatagtgat
gatctggtagccgccatgcgtaattttgaccagacctacaatgcttacagcgaattccag
acccgtatggagcgttactggtgcctacaatacttgattcaggaaaatatcactgagatc
gaggccaccgtttggcgagaaaatctagtgcgtttgcagaatatcccctacatcaccaag
gtacatggcatgcctgagttggctgctggcactcaagtcaagcttgagatcaagcgcgta
gatactttattgctggagctggaaacacgttttgttgcgttggcgaatgtggaaacaact
gttgaagaagtggcgggagttgcgtaa
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