Methyloradius palustris: ZMTM_15940
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Entry
ZMTM_15940 CDS
T07445
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mpau
Methyloradius palustris
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpau03000
]
ZMTM_15940
Transcription factors [BR:
mpau03000
]
Prokaryotic type
Helix-turn-helix
Other families
ZMTM_15940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_2
HTH_30
AAA_3
HTH_7
PAS_4
Mg_chelatase
HTH_29
AAA_16
HTH_23
HTH_28
Phage_CP76
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCM25335
UniProt:
A0A8D5G3Z6
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All DBs
Position
1729678..1731567
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AA seq
629 aa
AA seq
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MPNSVIDKSQIIRDARETFLSGGKLQKGIVAEEIIRSWERSLANGIDATANSRSQVLTVA
ELKQRREQHHQLLAYAQPEMATLNEQIAHTRSMVILTDDEGVILHSLGDNHFLTDPQKIA
LSAGASWHENERGTNAIGTALMEAAPMTVQGAEHFIERNHILSCSAVPIFGIRNELLGTL
DVSNDFLIPQQHTLALVKMAAQMIENRLFSASCQGDIALHFHARPEFIGTLWEGIAVFNG
DGRLLAINRSGQFQLGFDSELMKNRAVYFQDIFEPTLNSLSSGHLVFPIKLSNGARLYAR
ADSSQSKVSAQPLPVTNNKPAKRDCAANLEMLNTGDSRLAKAISQVQRVLDQDIAILIEG
ETGVGKELFARAIHEASSRQDGPWVAVNCAALPEGLIESELFGYEEGAFTGARRKGSAGK
LEQANGGTLFLDEIGDMPLALQSRLLRVLQERSVTPLGSSKSKPLDFMLISATNQKLREN
VEKGVFRRDLYYRLNGLNVSLPALRERSDLGALISLIMEIEQASKANISPSIMSLFRQHP
WPGNIRQLHNVLKTALALSGGETINESHLSDDFLEEMSQINTSEPQASMSALNSELVRTT
LHKHAGNVSAAARELGISRNTFYRKMNDQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcctaattcggtcattgataaatcgcaaatcatacgagatgcgcgcgagacttttctc
agcggcggcaagctacaaaaaggcatagtcgctgaagaaatcattcgctcttgggagcgc
tctctcgctaacggtattgatgctacagccaacagccgcagccaagtattaaccgtggct
gaactcaagcaacgccgcgaacaacatcatcagttgctggcctatgcccaacctgaaatg
gctacgctgaatgagcagatcgcacatacgcgcagcatggtgattttgacggatgacgaa
ggcgtgattttgcatagcctgggcgataaccacttcctcactgatccgcaaaaaattgcg
ctgagcgcaggcgcttcgtggcatgagaatgaacgcggcactaatgcgattggcacggca
ttgatggaagctgcgccaatgacagtacaaggcgcggagcattttattgaacgtaatcac
atcctgagctgttctgcagttccaatctttggcattagaaacgaattactgggcacgctg
gatgtttcaaatgatttcctgattccgcagcaacatacgctggccttggtaaaaatggct
gcgcagatgatagaaaaccgcctgtttagcgccagttgccaaggtgatatcgccctgcac
tttcacgccaggccagaattcatcggcacactatgggaaggcattgccgttttcaatggc
gatggccgattgctggcgattaaccgcagcggacagttccagcttggttttgatagcgaa
ttgatgaaaaatcgcgcagtctatttccaggatatattcgagcccacactcaacagctta
agcagcggccacctcgtattcccgattaagctaagcaatggcgcacgcctgtatgcgcgt
gctgatagtagtcaaagcaaagtatcagcccagcctcttcccgtcacaaacaacaagcct
gcaaaacgtgattgcgccgccaatctggagatgctgaatactggcgatagccgcttggct
aaagccatcagccaagtgcaacgtgtactagaccaagatattgcgattctgattgaaggc
gaaaccggcgtaggcaaagagctatttgcacgcgccatccacgaagccagtagtcgccag
gatggcccctgggttgcagtcaactgtgctgcactgcctgaaggtctgattgaatccgag
ttatttggttatgaagaaggcgcgtttactggcgcgcggcgcaaaggcagtgctggcaag
ctggaacaagccaatggcggcacgctatttctggatgaaatcggcgacatgccgctggcg
ttgcaatcacgtctcttacgcgtattgcaagaacgcagcgtgacgccgctgggcagcagc
aaatcaaaacctctcgatttcatgctaatcagtgctaccaaccagaagctacgcgagaat
gtagaaaaaggagtgttcaggcgcgacctctattaccgcttaaatggccttaatgtgagt
ttgcctgctttgcgcgaacgcagtgatctcggcgcattgatcagcttgattatggaaatc
gaacaggctagcaaagccaacatcagcccttctattatgtcgctgttcaggcagcaccca
tggccaggtaatattcgccagctacacaatgtattgaaaaccgcgctggctttgtctggt
ggcgagactattaatgaatcgcatttatcagatgattttcttgaggaaatgagccagatc
aacaccagtgagccgcaggcttccatgtctgcactcaatagcgagctggtgagaacaacc
ctgcacaaacatgctggtaatgtctcggcagcggctcgcgaactggggattagccgcaac
accttttaccgcaagatgaacgaccaataa
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