Methyloradius palustris: ZMTM_18750
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Entry
ZMTM_18750 CDS
T07445
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mpau
Methyloradius palustris
Pathway
mpau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ZMTM_18750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpau03019
]
ZMTM_18750
03009 Ribosome biogenesis [BR:
mpau03009
]
ZMTM_18750
03036 Chromosome and associated proteins [BR:
mpau03036
]
ZMTM_18750
Enzymes [BR:
mpau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ZMTM_18750
Messenger RNA biogenesis [BR:
mpau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ZMTM_18750
Ribosome biogenesis [BR:
mpau03009
]
Eukaryotic type
90S particles
RNase
ZMTM_18750
Prokaryotic type
rRNA processing factors
ZMTM_18750
Chromosome and associated proteins [BR:
mpau03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ZMTM_18750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BCM25616
UniProt:
A0A8D5JRM2
LinkDB
All DBs
Position
complement(2048609..2049310)
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AA seq
233 aa
AA seq
DB search
MSQTGLARLIGHDFHHPALLTQALTHRSFSGINNERLEFLGDGMLNCIIAHQLYQRYPRL
DEGDLSRLRAQLVKEATLGEIALKLNIGESLKLGEGELKSAGWRRPSVLADALEATIGAV
FLDGGFEAAEQFVVRIYSDLFEKIDPKSIDKDPKSLLQEYLQGRKMALPSYEVVNVEGDP
HEQLFKVECHIPMLDLITCGEGASRRIAEQKAAELAYVQLINTPSTKKSQQHE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacgggcctagctcggcttattggccatgactttcatcatccagcattgtta
acgcaggcgctaacgcaccgcagtttcagcggcattaacaatgagcggctggagtttttg
ggtgatggtatgctcaactgcatcatcgcccatcaactatatcagcgttatccaaggcta
gatgaaggcgacttgagtcgcttgcgtgcgcaactggtgaaagaagcgacgctgggtgaa
attgcgctcaagctcaatattggggaatcgctcaagctcggtgaaggtgagctcaaaagc
gcgggttggcgtcgtccttcagtgttggccgatgctctggaagccacgattggtgcggtg
tttcttgatggcggttttgaagcggcagagcagttcgtggtcagaatttatagcgatttg
tttgaaaaaattgatcccaagtctattgataaagatcctaaatccttgctgcaagagtat
ttgcagggtcgaaaaatggcattacctagctatgaagtggtcaatgtagaaggtgatccg
cacgagcaattatttaaggttgagtgtcatattcccatgcttgatctgatcacttgtgga
gagggtgcgagccgtcgtatcgccgagcaaaaagcagcagaattggcctatgtgcaactc
atcaatacgccatccacaaaaaagtcgcagcaacatgagtag
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