Methyloradius palustris: ZMTM_20250
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Entry
ZMTM_20250 CDS
T07445
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
mpau
Methyloradius palustris
Pathway
mpau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ZMTM_20250 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpau03400
]
ZMTM_20250 (xseB)
Enzymes [BR:
mpau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ZMTM_20250 (xseB)
DNA repair and recombination proteins [BR:
mpau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ZMTM_20250 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
Motif
Other DBs
NCBI-ProteinID:
BCM25766
UniProt:
A0A8D5JRS7
LinkDB
All DBs
Position
2213812..2214081
Genome browser
AA seq
89 aa
AA seq
DB search
MPKNTKTAASNIENSGSEDRPSFDTALSELESLVQQMESDQMPLEQSLAAYKRGTDLLRF
CQKTLADVEQQVRILDDKNQLQTYTDSED
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaatacaaaaaccgctgcctctaatattgaaaactctggttcggaagacagg
ccgagtttcgatacagcactttctgagcttgagtcacttgtgcagcaaatggaatctgac
cagatgccacttgaacaatccctagctgcctataaacgtggaactgatttattacgtttc
tgccaaaaaacgctggcagatgtagagcagcaggtgcgtatccttgatgataaaaatcag
ttgcaaacttatacagatagcgaagattga
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