Methyloradius palustris: ZMTM_24130
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Entry
ZMTM_24130 CDS
T07445
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
mpau
Methyloradius palustris
Pathway
mpau00860
Porphyrin metabolism
mpau01100
Metabolic pathways
mpau01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
ZMTM_24130 (cobD)
Enzymes [BR:
mpau01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
ZMTM_24130 (cobD)
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Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
AmpE
DUF2207_C
DHX37_C
DUF4191
Yip1
Motif
Other DBs
NCBI-ProteinID:
BCM26154
UniProt:
A0A8D5GG73
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All DBs
Position
2607782..2608696
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AA seq
304 aa
AA seq
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MNFIALIGALALTYYRPHQRPDWLKSVFLPYAHLLERNFNGGKRRHGLIAWLVGVFLPVL
IVGFAYFVLLEINALLGILFGVVSLYLILRFSHFSQRAENIANALRDRNIDQARALLHQW
EGAESANYTSAEVARISIETTLRRAHHGLFGPIFWFVLLGPAGALLYRLSHILQLEWPLE
KTNPFHQFSHQVFEWLDWLPTRVTAGGFAVVGDFEDAVYCWRTQAEAWKDKAIGIILASG
AGALGVRLGEPLAFRGILEFRPELGLGDEADADYVQSAVGLVWRVLVLMVSLLLLLTFAH
WLGN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaactttatcgcgctcatcggtgcgcttgcgctgacttattatcgtccacatcaacga
ccagactggttgaaatccgtatttctgccttatgcgcatttacttgagcgtaacttcaat
ggtggcaaacgcaggcatggtttgattgcatggctggttggcgtgtttctgcccgtatta
attgtcgggtttgcctacttcgtattactggagattaacgccttacttggtattttgttt
ggtgttgtttcgctttatttaattttacgcttcagccattttagtcagcgtgccgaaaac
atcgctaatgccttgcgtgaccgcaatattgaccaagcacgtgcactactacatcagtgg
gaaggcgcagagtcggccaattacacctctgcagaagtcgcgcgcatcagtatagaaact
actttacggcgggcgcatcatggcttgtttgggcctattttctggtttgtactgttgggg
cctgctggtgctttgctttatcgtctttctcacattctgcaactcgagtggccgctggaa
aaaacaaatccattccatcagttctcacatcaggtgtttgaatggctggactggctgccc
accagagtcaccgctggcggttttgccgtagtcggcgattttgaagacgctgtttattgc
tggcgtacccaagctgaagcgtggaaagataaagccataggcattattctcgccagtggc
gcaggcgcactgggcgtgcgtttgggcgagccactcgcgtttaggggcatattggaattt
aggccagagctaggcctaggtgatgaggctgatgcagattatgtacaaagcgcagtaggc
ctggtatggcgtgtgttggtactcatggtgagcctgctattgctgctcacatttgcacac
tggctaggaaactaa
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