Mycoplasmoides pneumoniae M129-B7: C985_0036
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Entry
C985_0036 CDS
T02596
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mpb
Mycoplasmoides pneumoniae M129-B7
Pathway
mpb03030
DNA replication
mpb03430
Mismatch repair
mpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C985_0036
03430 Mismatch repair
C985_0036
03440 Homologous recombination
C985_0036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpb03032
]
C985_0036
03400 DNA repair and recombination proteins [BR:
mpb03400
]
C985_0036
Enzymes [BR:
mpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C985_0036
DNA replication proteins [BR:
mpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C985_0036
DNA repair and recombination proteins [BR:
mpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C985_0036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
DUF655
HHH_3
T2SSK
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AGC03977
LinkDB
All DBs
Position
complement(36799..41130)
Genome browser
AA seq
1443 aa
AA seq
DB search
MVFDTETEKGKRIWALSQFLVKKNILDHNELHQLNNRIELVYLENDRENALFLVALTLKK
PLTIDIWNALYEGFQDAEGAELRITFQEDATFFKDGSTKSSVTLAIIKDYFKSFFGKDKK
YRILLEQELTHPNFLSYSNHELKANCQSQELDQWLIEQRQAFIKWMHQAGFTHFGFVSLF
NPPAEKQLKVKSMKVSKYDKQFETEVFSTEFVPIHKINQQMDEIKLMGQIFELKDFPGYN
NLRNTLNIYVTDFQLGGSLILKWFYKDPKTIEGIKIGTWVKATVKVERDAKTQLLQGIIK
EISPIETPAYYRRPDQDKQKRVELVFHTKMSAFDGINSVQEYAQFAKERDWKTIAVTDKD
NIHIYPTLYEVAKKYGLKAIYGLECNLIDDHIKIVSNPDKTKLKDATFVIFDIETTGLHG
RYDSVIEFAGIKVKHNREVERMQFFLKIDGPLPAAVTEITKITQAQLEDGMEQQAGLEKL
RAWLDGCVMVAHNGLSFDLPFLQTQFEKYNIAPLTNPLIDTLALSWALNPGFASHTLSNI
CAKLKFDFDDERLHRADYDTQALKKVFDYFKEQVELMGITNLEQLDQELNQQCHFELLKR
TFTNTGIIYIKSQSGFAKLYELLSIALTDNNATRPLVLTSTLQKFAKSFVITDNPVQGDI
FKAALTKPLKELEAAIKRVDFVLIAPPGAYAGYTIREGLKKEAIPNAIKLVVDTAQRLNK
LVAVASDAYFIHPWENEYYKAIVCAKGLGGRWHRHFNYKEREQRVPNVFVRTTGEMLNEM
SFLGEQLAYELVVENTNKLAKQLTADDLVPVQTKLQPPVIEGSNENLAAKTWSQAKAIYG
DPLPKLIEQRIQEELKAIIDNGFGIIYWISHLLVKQSVQDGYFVGPRGSIGSSLVANLIG
ISEINPLVPHYLCESCQYFEVNEEVDDGYDLMVRDCPKCGAKAAFKGDGHNIPFATFMGF
AGDKIPDIDLNFSSEYQAKAHAYVRELFGEQYTFRAGTIATVAEKTAYGYARNYFEIIKQ
TELATAPEIERFKQKLVGIKRTTGQHPGGIMIFPNHKSVYEFTPCGYPADDTSSDWKTTH
FEYDALGDTILKLDILGQDDPTMLKHLADLTHVNPQNIPRFDKKLTEMFWSVNPLKLKPH
YLDEPTGAIGIPEFGTKFVRKILEQTKPKGFGDLIRVSGLSHGKNVWADNAQKILKDQNL
SLKDVIACRDDIMLYLIHKGMQAKDAFEIMEKVRKGIALNAKEVQLMQSNGVEQHWINSC
LKISYLFPKAHAAAYVLMAWRIAWFKLYHPLSYYACLLSFKLKEHDVSGFKSGVSFVKQK
LEELNTLYRIKRIKPKEAELLTSYEVYLEMMARGIKLEQISLTHSHATRFVEHNGMLIAP
FITIPGMGEAVANSIIEARNEKPFSSLDDFKKRTKITKKHIEAFTQMQLLDEFREQDNQK
KLF
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgacaccgaaaccgaaaagggtaaacgcatttgagcattatcacagttttta
gttaagaaaaatattctcgatcacaacgaattgcaccaactcaacaaccggattgaactg
gtttacctcgagaatgatcgcgaaaacgccctgtttctcgtggcgctcactttaaaaaaa
ccgttaacaattgacatttgaaacgccctgtatgagggctttcaggatgcggaaggggca
gaactgaggattaccttccaagaagatgccaccttctttaaggacgggtccactaagtcc
agtgtcaccttagccattatcaaagactacttcaaaagcttctttggtaaggacaagaag
taccgcatcctgttagagcaagagttaacccatcctaacttcttgtcctacagtaaccat
gaactgaaagctaactgccagtcccaagaattagaccaatggttaattgaacaacgccaa
gccttcattaagtggatgcaccaagctgggtttacccactttggttttgtctcgttgttt
aatccaccagcggaaaaacaactaaaagtgaaatcaatgaaggtatccaagtacgacaag
cagtttgaaaccgaggtctttagtacggaatttgtccccattcacaagattaaccaacaa
atggatgagatcaaactaatggggcaaatctttgagttaaaggactttcctgggtacaac
aacctccgtaatacccttaatatttatgtcactgatttccaactaggtggttcgttaatt
ttgaagtggttttacaaggatcccaaaacaattgagggcattaagattggtacctgagtt
aaggccacggttaaggtcgaacgtgatgccaagacccaactactccagggtatcattaag
gaaatttccccgattgaaacccccgcttactatcgccgccccgatcaggacaaacaaaaa
cgggtcgaattagttttccacaccaagatgagtgcctttgatggcattaacagtgtccag
gaatacgcccagtttgccaaagaacgcgattggaagacaattgctgtcactgacaaggac
aacattcacatttatcccactttatatgaagtggccaaaaagtacggcttgaaggccatt
tatggtttggaatgtaacctcattgatgatcacattaagatagttagcaatcctgataaa
accaaacttaaggatgcgacctttgtcatcttcgacattgaaacaactgggttacacggt
cggtatgactcggtgattgagtttgcgggaattaaggtcaaacataaccgtgaagtggaa
cgaatgcagttctttctcaagattgatggacccttacctgcagcagttaccgaaattacc
aagattacccaagcacaactagaagatgggatggaacagcaagcggggttggaaaaactg
cgcgcttgactagatggttgtgtaatggtagcccataacggtttgagttttgacttgccc
tttttacaaacccagtttgaaaaatacaacattgcgccactaaccaatcccttaattgat
accttagccttatcctgggccttaaatcccgggtttgcctcccatacgttgagcaatatt
tgtgccaagctcaagtttgactttgatgatgaacgattgcaccgagcggattatgatacc
caggccttaaaaaaggtctttgactacttcaaggaacaggtcgaactcatggggattact
aatctcgagcagttagaccaagagttaaaccagcagtgccactttgaactgctcaagcgc
acttttaccaataccggcattatctacattaagagccaaagtgggtttgctaaactgtat
gaactgttatcaattgcgctcaccgataacaacgctactcgacccctagtgttaacttca
acactccaaaagtttgctaaatcctttgtcattactgataacccggtgcaaggtgatatc
tttaaagcggcattgactaaaccgcttaaagaattagaagcggccattaaaagagttgac
tttgttttaattgccccacctggtgcttatgctggttacaccatcagggaaggtttgaaa
aaagaagccattcctaacgcaattaagttagtggtggacacggcccaaagactcaataag
ttagtggcagttgcctcggatgcttactttattcacccctgggagaatgagtactataag
gccatagtttgtgccaagggtctgggtgggcgttgacaccgtcactttaactataaggaa
agggaacaacgggttcccaatgtgtttgtgcgtaccacaggggaaatgctcaatgaaatg
agttttttaggcgaacaattagcttacgagttagtggtcgaaaacaccaataagttagcg
aaacaactcaccgctgatgacctggtaccagtgcaaaccaaactccaaccaccagtaatt
gaaggttctaacgaaaacctggcagccaaaacctggagtcaagccaaggccatttacggt
gatcccttacctaagttaatagaacaacggatccaggaagagttaaaagcgatcattgac
aatggctttggcattatttactggatttcccatttactagtcaaacaatcggttcaagat
ggttactttgttggaccgcggggttcaattggttcttcgttggtagctaacctgattggt
atctcggaaattaatcccttagtgccgcattatctctgtgagagctgtcagtactttgag
gtcaacgaagaggtcgatgatgggtatgacctcatggtaagggattgtccaaagtgtggt
gccaaagcagcctttaagggtgatggtcataacattccctttgctacctttatgggtttt
gctggggacaagattcccgatattgacttaaacttttccagtgagtaccaagccaaagcc
catgcttatgtgagggaactgtttggtgaacagtacaccttccgtgctggcacaattgcg
acagtggccgaaaaaacggcttacgggtatgcgcgcaactactttgaaattattaaacaa
accgaattggccaccgctcccgaaattgaacgctttaagcaaaagttagtcgggattaaa
cgcacgaccggccaacaccccggggggattatgatcttccccaaccacaaatcggtatat
gagtttaccccgtgtggttatccagctgatgatacttccagtgattgaaaaacgacccac
tttgaatatgatgcgttaggggacaccatcttaaagttagatattctgggccaggatgat
ccgactatgttaaagcacctggccgatcttacccatgtcaatccacaaaacattccccgg
tttgacaagaagctcaccgaaatgttttggtcggtcaatcccttaaaactaaaaccgcac
tacttagatgaacccacgggagcgattgggattcccgagtttggtactaagttcgttcgc
aagatcttggaacaaaccaaaccaaagggctttggtgacctcattcgcgtctcgggtcta
agtcacgggaagaacgtgtgggcggacaatgcgcagaaaatcttgaaggaccaaaactta
agcttaaaggatgtaattgcctgtcgcgatgacattatgctctacctcattcataagggg
atgcaggccaaagatgcttttgagatcatggaaaaggtgcgtaagggaattgctctcaat
gccaaggaagtgcagttaatgcagagcaatggggtcgaacaacactggattaattcgtgt
ttaaagattagctacctgttcccgaaagcccacgccgcggcttatgttttaatggcctga
cgaattgcctggttcaaactgtaccacccgttgagctactatgcttgtttgttgagcttt
aaactcaaggaacatgatgtcagtggttttaaatcaggtgtgagctttgtcaagcaaaaa
ctagaggagctcaacacactgtaccgcattaaacggattaaacccaaagaagcagaactg
ttaaccagttacgaggtttatttagagatgatggcccgcggcattaaactagaacaaatc
tctttaacccactcccacgccactcgttttgtcgagcacaacggcatgctaattgcccct
tttattacgattccggggatgggggaagctgtggccaattcgatcatagaagcgcgtaac
gaaaagccctttagttcgctcgatgactttaaaaaacgcactaaaattaccaaaaaacac
attgaagcgtttacccaaatgcaactactcgatgagtttagggagcaagacaaccagaaa
aaacttttttag
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integrated database retrieval system
